SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for 281687.CJA08587 from STRING v9.0.5

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  281687.CJA08587
Domain Number 1 Region: 473-620
Classification Level Classification E-value
Superfamily Voltage-gated potassium channels 0.00000000000000107
Family Voltage-gated potassium channels 0.0038
Further Details:      
 
Domain Number 2 Region: 309-350,418-441
Classification Level Classification E-value
Superfamily Voltage-gated potassium channels 0.0000000000294
Family Voltage-gated potassium channels 0.01
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) 281687.CJA08587
Sequence length 715
Comment (Caenorhabditis japonica)
Sequence
MPSVEFLTSPQFERNAISEMSHSLPSHPDQAPNSPTQPLRSSSAFSQQIRMLKLNSEGIN
EEAESCSSSSTSSKSLEDMVSLYKVVDKETEQAAETTIKASKKSAEAEDAISHKSSTNSQ
TNGRFRTSSIGEDPKKPPIKGILRQSPYISKEDISQSNESTLQRQVRKSRASSVSRRGEN
VDDIIVYDDRRTEPGNHDAIDDYYAKNYYTVTGIYQKNINHLAKHGYGGVDEENDEDEAV
RRNYVKHEKRTLSMAQSTRSMPIIPINNRETKKKKFFSIFFSGFFWTRQKTFWRKKVPVF
GQKLSFHQSFYWFAHNHKKIGFRHFCMILLVLSYTLLGAALFYSIESKHEHETMQIHKRK
LERVIYEIAQTLELEILDPMKLTNITQMEYFITRAYVKLLTAEDLYSGSTFYKHEDPKNL
KWTYGSACFFSMNVYTTTGYGVGPKKKFFRSFLLLFLGETKKFVLFMHVRKKSSIAPSST
FGKAMVIIYGLIFVPLTAVVIRDLGQWALLYLTKMYTILIDNFRRVRGFVDKFDEDEIMS
LPIKFSVSVMILYLLSATMFIFEYDELSGPPGSGISFFHAFYFSFVSMSTIGLGDIMPNN
VTFSPLITIMFFFGMPILKVVNRVTYICLENGVFGTMTVLENRLDTIWSKATVLPTAQMA
PEQHIADVASRKHSMLSEGMIPDEPLNPVADVMQTLKVATPVKQILKRLQMLRRS
Download sequence
Identical sequences CJA08587 281687.CJA08587

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]