SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for 281687.CJA15114 from STRING v9.0.5

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  281687.CJA15114
Domain Number 1 Region: 82-186
Classification Level Classification E-value
Superfamily RNA-binding domain, RBD 2.28e-26
Family Canonical RBD 0.0000855
Further Details:      
 
Domain Number 2 Region: 188-295
Classification Level Classification E-value
Superfamily RNA-binding domain, RBD 0.000000000001
Family Canonical RBD 0.0069
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) 281687.CJA15114
Sequence length 370
Comment (Caenorhabditis japonica)
Sequence
MYGPYPYPPEVAEMIQSGGFPFAMMNRGMPPPQWNGYPVIHPFELHQMLRVLSISIKNSR
KKNAGRGFPRPRLRVLPLVFLFFVQFQQMGMGQYQQHDSPPQLRKLFIGGLSHDTTDEQL
GNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAEAAMKDRPHVLGGKTVDSKRAI
PREQMSSMIPPPFFETDPAPGCKILLQGISNGTHSVDSLRIYFETFGTLDQVEILGSPRG
LGFVIYEDKESAERCLAHNGGRHIVNERKIEVRVFTKHSNGSTYWKRPQQQPHSRELYEQ
LSHLSLKDGDRKSTGNSSSAADTPQNYDEDSNYGGTTTEDDCNAFEHEEGSSEESSAEQT
AADEKAETTQ
Download sequence
Identical sequences 281687.CJA15114 CJA15114

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]