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Domain assignment for 29760.GSVIVG00009068001 from STRING v9.0.5

Domain architecture


Domain assignment details

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Strong hits

Sequence:  29760.GSVIVG00009068001
Domain Number 1 Region: 902-1163
Classification Level Classification E-value
Superfamily DNA/RNA polymerases 3.45e-82
Family Reverse transcriptase 0.0012
Further Details:      
 
Domain Number 2 Region: 623-733
Classification Level Classification E-value
Superfamily Acid proteases 0.000000394
Family Retroviral protease (retropepsin) 0.02
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) 29760.GSVIVG00009068001
Sequence length 1166
Comment (Vitis vinifera)
Sequence
MDPPPEDQNSQHGQWGNPNAYLSMRDKMHPPRMSAPSCIVPPLEQPVIRPHIVPLLPNFH
GMESENPYAHIKEFKEVCNTFREGGASIDLMRLKLFPFTLKDKAKIWLNSLRPRSIRNWV
DLQAEFLKKFFPTHRTNGLKRQISNFSAKENEKFHECWERYMEAINACPHHGFDTWLLVS
YFYDEMSSSMKQILETMCGGDFMSKNPEEAMDFLSYVSEVSRGWDEPNSREKGKFPSQPT
QNPKGGMYVLSEDMDMKAKVATIARRLEELELKKMHEVQAISETQAHVMPCTIFQSCDHV
VDECPTMPAVREMLGDQANVVGQFRPNNNAPYGNTYNSSWRNHPNFSWKPRSPPYQPQAQ
TQAPQQTSSVEQAIVNLSKVMGDFVGEQKAINSQLHQKIENVESSQIKRMEGMQNDLSQK
IDNIQYSISRLTNLNTVNEKGKFPSQPSQNPKGIHEVETQEGESSKLREVKAVITLRSGK
EVDQPLPKVRQDEELMSKKTLVKESNNQEEKSGKKSASKSSIEEEPRIVIKEDMMKKHMP
PPFPQALHGKKEIKNSSEILEVLRQVKVNIPLLDMIKQVPTYAKFLKDLCTVKRGLHVTK
NAFLTEQVSAIIQSKSPVKYKDPGCPIISVNIGGTHVEKALLDLGASVNLLPYSVYKQLG
LGGLKPTAITLSLADRLVKIPRGVIEDVLVQVDKFYYPVDFVVHDTNPTVKEANYVPIII
GRPFLATSNAIINCGNGVMQLTFGNMTLELNIFHLCKRHLHLEEEEGLEEVCLINTLVEE
HCDKNLEESLNESLAMLEEGLPEPSDVLAIMSPWRRREEILPLFNKGDSQGAAVEDSPKL
VLKPLPVDLKYAYLEEDEKCPVVVSSTLTSDQEDSLLGVLRKCKKAIGWQISDLKGISPL
VCTHHIYMEEDAKPVRQPQRRLNPHMQEVVRGEVLKLLQAGIIYPISDSLWVSPTQVVPK
KSGITVVQNEKGEEVSTRPTSGWRVCIDYRRLNSVTRKDHFPLHFMDQVLERVSGHLFYC
FLDGYSGYFQIEIDLEDEEKTTFICPFGTFAYRRMPFGLCNAPTTFQRCMLSIFSDMVER
IMEVFMDDITVYGSSYEECLLHLEAVLQRCIEKDLVLNWEKCHFMVQQGIVLGHIISKNG
IEVDKAKVELIVKLPPPTNVKELGNS
Download sequence
Identical sequences 29760.GSVIVG00009068001

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