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Domain assignment for 29760.GSVIVG00009851001 from STRING v9.0.5

Domain architecture


Domain assignment details

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Strong hits

Sequence:  29760.GSVIVG00009851001
Domain Number 1 Region: 487-582
Classification Level Classification E-value
Superfamily Ribonuclease H-like 2.58e-19
Family Retroviral integrase, catalytic domain 0.053
Further Details:      
 
Weak hits

Sequence:  29760.GSVIVG00009851001
Domain Number - Region: 220-261
Classification Level Classification E-value
Superfamily Retrovirus zinc finger-like domains 0.000126
Family Retrovirus zinc finger-like domains 0.0065
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) 29760.GSVIVG00009851001
Sequence length 582
Comment (Vitis vinifera)
Sequence
MATKTSIFSSIKSGSPMITSEKLVGSENYLSWSASVELWFMGQEYEDHLVTQEADIPEVD
RVQWRKIDAQLCSVLWQSVDPRILLHLRAYKTCFKFWTQAKGLYTNDIQRLYKVASAIVH
ISQQDLDLSTYIGQIASLKEELLTVMPLTPDVGAQQTQLDKFFMVLTLIGLRPDLEPIRD
QILGSSSVSSLDDVFARLLCISSTQTLPSDSTSDSSVLVSQTTSRGGRSGTRGRGQRPHC
TYCNKLGHTRDRCYQLHGRPPRTAHMAQSSDSLLPQPPSSSASQTSQAFIASIAQPGNAS
ACLTHTSSLGPWILDSGASDHLSGNKDLFSSITTTSALPTVTLANGSQIVAKDIGLALPL
PSLPLTSVLYTPECPFNLISISKITRTLNCSITFSDKFVTLQDRSTGKTIGIGRESQGLY
HLTSDSFPVVCISTDAPLLIHNRLGHPSLSKFQKMVPRFSTLSSLPCESCQLGKHTCVSF
PKRLNNRAKSPFELVHTDVWGPCRTASTLGFQYFVTFIDDYSRCTWLFLMKNRAKLFSIF
QKFYVEIQTQFNISIRVLRSDNAREYFSAPFTSFMSHHGILH
Download sequence
Identical sequences 29760.GSVIVG00009851001

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