SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for 29760.GSVIVG00016879001 from STRING v9.0.5

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  29760.GSVIVG00016879001
Domain Number 1 Region: 237-284
Classification Level Classification E-value
Superfamily Retrovirus zinc finger-like domains 0.0000262
Family Retrovirus zinc finger-like domains 0.0037
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) 29760.GSVIVG00016879001
Sequence length 433
Comment (Vitis vinifera)
Sequence
MEESSLTVAPSILDGDNYETWAVRMTVHLQALDVWEAVEENYEVPPLGANPTVAQMKLHK
ERRTRKAKAKACLFAAVSPSIFIKIMKIDSAAEIWEYLKEEYKGDERIKNMQVMNLIREF
EMKKMRESDAVKDYAAQLLSIADKVRLLGKEFSNEKIVQKILVTLPEKYEVTISSLENSK
DLSTISLTELLHSLEAVEQRRLMRQGDTAEGAFQARMQKNAGHKNGKVNNNKSCGNNQKN
GVFPPCPHCKKTNHSPQKCWWRPDVKCNKCGKQGHVERICKNQQQEETNAVVDYCQEEQL
FAATNCIIKDAEGKEVFNIKMKGKSFALNLLEDEHTAILQQDSTTMFWDRRVEHFHHDDV
LYMKKNQIVEGLPDLEKDLLICATCQYGKQTKLPFPKKISWRATQKLQLVHTDVGGSQKM
PSLKWNANNVWWI
Download sequence
Identical sequences 29760.GSVIVG00016879001

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]