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Domain assignment for 29760.GSVIVG00016976001 from STRING v9.0.5

Domain architecture


Domain assignment details

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Strong hits

Sequence:  29760.GSVIVG00016976001
Domain Number 1 Region: 484-644
Classification Level Classification E-value
Superfamily Ribonuclease H-like 1.26e-42
Family Retroviral integrase, catalytic domain 0.011
Further Details:      
 
Weak hits

Sequence:  29760.GSVIVG00016976001
Domain Number - Region: 220-260
Classification Level Classification E-value
Superfamily Retrovirus zinc finger-like domains 0.00214
Family Retrovirus zinc finger-like domains 0.0073
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) 29760.GSVIVG00016976001
Sequence length 746
Comment (Vitis vinifera)
Sequence
MATKASIFSSVISGSPMITSEKLVGSENYLSWSASVELWFMGQGYEDHLITQEADIPEVD
RVQWRKIDAQLCSVLWQSVDPKILLHLRAYKTCFKFWTQAKGLYTNDIQRLYKVASAIVH
ISQQDLDLSTYIGQIASLKEEFLTVMPLTPDVGVQQTQLDKFFMVLTLIGLRPDLEPVRD
QILGSSLVPSLDDVFARLLRISSTQTLPFDSTSDSSVLVSQTSSRGGRSGTRGRGQCPHC
TYCNKLGHTRDRCYQLHGRPPRTAHVAQSSDSPLPQPPSSSASQASVASVAQPGNASACL
TNTSSLGPWILDSGASDHLSGNKDLFSSITTTSALPSVTLANGSQTVAKGIGLALPLPSL
PLTYVLYTPECPFNLISISKITCTLNCSITFSDKFVTLQDRSTGKTIGIGRESQGLYHLT
SDSSPAVCISTDAPLLIHNRLGHPSLSKFQKMVPRFSTLSSLPCESCQLGKHTRVSFPKR
LNNRAKSLFELVHTDVWGPCRTASTLGFQYFVTFIDDYSRCTWLFLMKNRAELFSIFQKF
YAEIQTQFNISIRVLRSDNAREYFSAPFTSFMSHHGILHQSSCAHTPQQNGVAERKNRHL
VETTRTLLLHSNVPFRFWGDAVLTACYLINRMPSSVLHDQIPHSLLFPDQPLYFLPPRVF
GCTCFVHILTPGQDKLSAKAMKCLFLGYSRLQKGYRCYSLETHRYFISADVTFFEDSPFF
STTSESLPVSEVLPIPIVSPPDAMPP
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Identical sequences 29760.GSVIVG00016976001

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