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Domain assignment for 29760.GSVIVG00019821001 from STRING v9.0.5

Domain architecture


Domain assignment details

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Strong hits

Sequence:  29760.GSVIVG00019821001
Domain Number 1 Region: 407-563
Classification Level Classification E-value
Superfamily Ribonuclease H-like 1.39e-39
Family Retroviral integrase, catalytic domain 0.0037
Further Details:      
 
Domain Number 2 Region: 156-196
Classification Level Classification E-value
Superfamily Retrovirus zinc finger-like domains 0.0000000148
Family Retrovirus zinc finger-like domains 0.0018
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) 29760.GSVIVG00019821001
Sequence length 617
Comment (Vitis vinifera)
Sequence
MAEEAGKTSGIEKFDGTDFAYWRMQIEDYLYGRKLHLPLLGTKPESMKAEEWALLDRQVL
GVIRLTLSRSVAHNVVKEKTTADLMKALSGIWEAMRMAVSNSTGKEKLKYNDIRDLILAE
EIRRRDAGETSGSGSALNLETRGRGNNRNSNQGRSNSRNSNRNRSKSRSGQQVQCWNCGK
TGHFKRQCKSPKKKNEDDSANAVTEEVHDALLLAVDSPLDDWVLDSGASFHTTPHREIIQ
NYVAGDFGKVYLADGSALDVVGLGDVRISLPNGSVWLLEKVRHIPDLRRNLISVGQLDDE
GHAILFVGGTWKVTKGARVLARGKKTDTLYMTSCPRDTIAVADASTDTSLWHRRLGHMSE
KGMKMLLSKGKLPELKSIDFDMCESCILGKQKKVSFLKTGRTPKAEKLELVHTDLWGPSP
VASLGGSRYYITFIDDSSRKVWVYFLKNKYDVFETFKKWKAMVETETSLKVKCLRSDNGG
EYIDGGFSEYCAAQGIRMEKTIPRTPQQNGVAERMNRTLNERARSMRLHAGLPKTFWADA
VSTAAYLINRGPSVPMEFRLPEEVWSGKEVKFSHLKVFGCVSYVHIDSDARSKLDAKSKI
CFFIGYGDEKFGYRFLG
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Identical sequences 29760.GSVIVG00019821001

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