SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for 29760.GSVIVG00021233001 from STRING v9.0.5

Domain architecture


Domain assignment details

(
show help)

No Significant Hits.

Weak hits

Sequence:  29760.GSVIVG00021233001
Domain Number - Region: 236-273
Classification Level Classification E-value
Superfamily Retrovirus zinc finger-like domains 0.0003
Family Retrovirus zinc finger-like domains 0.008
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) 29760.GSVIVG00021233001
Sequence length 286
Comment (Vitis vinifera)
Sequence
MEEDSSFSAMAPLVFNGDNYTIWAVRMEAYLDAVDLWEAVEDDYDVPPLSDNPTMAQVKN
HKERKTKKSKAKACLFAAVSATIFTRIMSLKSSKAIWSYLKFEYEGDDQIKGMKVMNLIR
DFELQKMKESKTIKEYSERLLSIANRVRLLGSEFKDSRIVEKIVVTIPERFEATITSLEN
TKDLSKITLAELLNSLQAQEQQMVMRQESTVEEALPTKHEDAAAHRSNKNKVGSSKGKYP
PCKHCDITSHSPFKCWKRTDAKCNKCNQLGHLQEPKPAARRRCPNR
Download sequence
Identical sequences 29760.GSVIVG00021233001

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]