SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for 29760.GSVIVG00026389001 from STRING v9.0.5

Domain architecture


Domain assignment details

(
show help)

No Significant Hits.

Weak hits

Sequence:  29760.GSVIVG00026389001
Domain Number - Region: 109-150
Classification Level Classification E-value
Superfamily Retrovirus zinc finger-like domains 0.0698
Family Retrovirus zinc finger-like domains 0.0069
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) 29760.GSVIVG00026389001
Sequence length 408
Comment (Vitis vinifera)
Sequence
MYISGKDKLGYINRDLPQPLQTDPAFTKWRTENAEDRVYTFLDGLDDWLDKIQADVLQIQ
RFPTMEQAYAQVRREDLRQSVMMMNEDTISSGAMLSRGGQKPQHQLSFQTPSNGKPNTAT
KPKSQGEEGGCTHCGNTKHTKETCFKLHGYPDWWYELKAKKKREASGGDNPGHAALMSVE
PQLSLIPQQESSICTSYVFSCSKTGNHDGWIIDSGAMDHMTFDPCDFSKATQLKRICIVN
ANGITYPVTGAGTVALSPSFSLPNTLLVPSLSNKLLSIRQDILTKEIIGCGTKREGLYYM
DDFSYGRANSIYSDGVKERQIWLWHNQLGHPSFQYLRCLFLDLFTKFNESDFKCEACIQA
KSHRVPYSISLNKCDTPFFIVHSDVWGPAPITISSSVRWFVTFVDDCT
Download sequence
Identical sequences 29760.GSVIVG00026389001

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]