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Domain assignment for 29760.GSVIVG00035324001 from STRING v9.0.5

Domain architecture


Domain assignment details

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Strong hits

Sequence:  29760.GSVIVG00035324001
Domain Number 1 Region: 742-774
Classification Level Classification E-value
Superfamily Retrovirus zinc finger-like domains 0.000000249
Family Retrovirus zinc finger-like domains 0.0028
Further Details:      
 
Weak hits

Sequence:  29760.GSVIVG00035324001
Domain Number - Region: 968-1046
Classification Level Classification E-value
Superfamily Acid proteases 0.00015
Family Retroviral protease (retropepsin) 0.038
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) 29760.GSVIVG00035324001
Sequence length 1476
Comment (Vitis vinifera)
Sequence
MSRRSSDSQDTVVNSEEINYPKIQNDLDDWKLPKVSNQEIYKKGTFKSIDKHKKDGYNFI
HFGMIQVAAKPLTRLGLNTSIVMCLRDNRHLEYRDSIIGAVQAGLNDDPVYFQCYPNFTV
RIRDADILDSVVLHIKTHGFKIKPGNSPVSIITRFAYKTMNTSVGSGALCTSPKGETTYF
HSDMLDKLDFIIPKKILWKDVDFPENWHFANVVPAIAQRSESIEQIVQYPDGGGELVFSK
SFRHSSSPRVSVYEPSRASSSSIPVRTTREEEGSSSGNPKNIKLTGVGSHINMIDTISLS
DEDFEINKDLLRKDFYSKVNKQRNDWFFSTIPKVIRSIYQEEFYAYLRQEKKNIKFWIWF
ELFKQEEYPYYPCKRINHTKSTDKTKTFEFSKEFQENPQINQAFVDRINHKIKDNLVDPL
IRINMVKGDISSEEEADELIKMFEESHNQIINNLEAFKTRNYYPRPTFPDMQFEERNQYT
QASYTSGTIYEWNIDGMTEYNILTKLQEMTMVSIAYKLNNRLPDHAVAQTIVAGFTGQLK
GWWDNYLTFDDRNSILKAYRINESNEVVKDEDGQDIEDAVATLIYSISKHFIGDRAKIKD
KTADLLTNLKCPKLHDFRWYKEVFLTKVMLRSDCNQSFWKEKFISGLPKLFSERIRIKIR
EQYNGQIPYDKLTYGEIISIVTAEGIKLCNDFKLKQQMKNEQKIYKNEFGSFCSQFGTYD
NYRMNDTKQSRHVQRRVNKDTQKKIETPLDVKPIICFKCGKVGHYKKDCRVKQKINNLSV
SDDLKNMLCKVMLNSDSESRTDSDNEDDINQLDSSGEVSSQSSSDQAECIKGNCNCPKIR
NLSLDTLRKVEDEKTKQNLYEVFKKSVVKVEAKKTVNPYNLNDILNRFDQQSPKEVSIKE
LHEKVKQHKKEIKELRQFIKIHMDIPESSHVNDNETDTFLNTVSRVIFQRWEVSLTIVVK
DKFVFDIIALIDSGATENCLQEGLVPIPLCEETSMSLFGANGKRLAIKYKLTDVHIHNHD
VCIKQTFILVKDLKEKALLGIPFLSSIYPLWVDNQGIRTKLFDKEILFEFVNPVESITPC
DQEINLVKIDDPPKMLGTQCIHKLIINDILSIHLCISKYQTDILNQGILKVVFTSEKTIK
YIAFKHNLIDWIILNPNFQIKLIKGESSIPNHSTHGICRIHMNMAPKKDKQPFRSIKPTD
SKNPHSALSEKFMPSYYDHFEVAGSSSHFNHHIPSASPSRDIDSSSESLPFVEDSFPTNP
SFNNTNTLSDYINCIFEWQGRYETLERKLELVDFHKLMLKAQASFSPLENGENKHSTPLV
NDKLSEEELGYRMLRMYHHKTENLYSLKPDLRLLILEKAKSSAEERQSFISSYFQDLHLY
LSTNIGLKVPGLSLVTDKEVDDSKICRMIEEHFQYQKGIKKMICNCNRNFTISRVCLDLQ
YYSPISIKFKGEDLLLTPEKLLDHGLVHQIICSDLN
Download sequence
Identical sequences 29760.GSVIVG00035324001

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