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Domain assignment for 29760.GSVIVG00037034001 from STRING v9.0.5

Domain architecture


Domain assignment details

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Strong hits

Sequence:  29760.GSVIVG00037034001
Domain Number 1 Region: 480-638
Classification Level Classification E-value
Superfamily Ribonuclease H-like 1.77e-41
Family Retroviral integrase, catalytic domain 0.0054
Further Details:      
 
Weak hits

Sequence:  29760.GSVIVG00037034001
Domain Number - Region: 230-260
Classification Level Classification E-value
Superfamily Retrovirus zinc finger-like domains 0.000645
Family Retrovirus zinc finger-like domains 0.0059
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) 29760.GSVIVG00037034001
Sequence length 797
Comment (Vitis vinifera)
Sequence
MSEKSTIVFQSEGTFNPGIILTESNYDVWSQLMEMHIAEREKLSYIRGKTNLPKELEDGY
EKWYVENQKVKRWLLMSMSPEIMKRYLRLPTAQEIWSALSKAFYNGSDELQVFTLNQKVF
TAKQNGRSLSKYYGELTELFCELDHRDKVVMKDPEDIAAYRKSIERQRVHIFLSGLGGDF
EQVRGEILRKDPLPDLEECYALIRREAVRHASMKAESDNPDTLAMVTNHPRTDPNIDKST
FKCTHCNKTGHTKSRCFEIVGYPDWWDHNCDQRKKDSKKTSTAAIAEIKTEANVDEKASA
LIAATNYGGKPSSQKFVSTANGNTTPVIGEGSLTLTDTLNLDSILVAPSLNYNLLSVSQI
TAALSCIVIFWPEFCVFKDIQTRQTIGFGIKRGKLYYLDLQSKDSNKLRQALMADGSEGE
KKKSEIWLWHRRLGHASFGYLKKLFPSLFAKSDISGFRCDICELAKSHRASFPLILNKSP
SPFMVIHSDVWGPSKVPTLSGSRWFVTFIDDCTRMTWLCLMKTKDEVNLLFQNYHKMIET
QYNAKVRVLRSDNGGEYQSSDLQKYLEGHGIIHQTTCSNTPQQNGVAERKNRHLLEVVRA
SLIAAKTPISYWGEAITSVVYLINRVPSSSINFQRPLQALTNAVVAPTVPNLPPRVFGCV
AFVHLHKHQRTKLTSHALQCVFVGYALHKKGYRCYHPPTRQMYITMDVVFHEDSMYFSSE
SELQEEYHKEIQTLDYDYHISKEDESGQSELVNQEVGELDTSGQQFGSEDVDYYQKVLFC
RPNYNGFKHLCVVIIFI
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Identical sequences 29760.GSVIVG00037034001

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