SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for 298386.PBPRA1164 from STRING v9.0.5

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  298386.PBPRA1164
Domain Number 1 Region: 251-433
Classification Level Classification E-value
Superfamily post-AAA+ oligomerization domain-like 1.19e-73
Family MgsA/YrvN C-terminal domain-like 0.0000000708
Further Details:      
 
Domain Number 2 Region: 10-238
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 1.06e-42
Family Extended AAA-ATPase domain 0.0013
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) 298386.PBPRA1164
Sequence length 446
Comment (Photobacterium profundum SS9)
Sequence
MSNFSLDFSSDFRPLAARMRPRTVEEYIGQQHILGVGKPLRRALEAGHLHSMILWGPPGT
GKTTLAEVAANYANAEVERVSAVTSGVKDIRIAIDKARENKMAGRRTILFVDEVHRFNKS
QQDAFLPHIEDGTVTFIGATTENPSFELNNALLSRARVYKLKSLETAEVLAVVEQALKDS
SRGISDTNLEFVDDVKERLSELVCGDARMSLNYLEQLVDMAEENKAGIKYITLELLAEVA
GEKIGRFDNKGDLWYDMISAVHKSIRGSNPDGALYWFARMLQAGCDPLYIVRRLLAIASE
DIGNADPRAMQVAVSAWDCFTRIGAYEGERAIAQAIVYLACAPKSNAVYVAFAKAKQDAA
HHPDYEVPPHLRNAPTKLMKELGYGAEYRYAHDEPGAYAAGENYFPPELKDIRYYEPSNR
GLETKIAEKLDYLASLDAKSTLKRYQ
Download sequence
Identical sequences Q6LT01
gi|54308357|ref|YP_129377.1| 298386.PBPRA1164 WP_011217906.1.54600

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]