SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for 29883.JGI294460 from STRING v9.0.5

Domain architecture


Domain assignment details

(
show help)

No Significant Hits.

Weak hits

Sequence:  29883.JGI294460
Domain Number - Region: 308-353
Classification Level Classification E-value
Superfamily Ubiquitin-like 0.0502
Family Ubiquitin-related 0.027
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) 29883.JGI294460
Sequence length 465
Comment (Laccaria bicolor)
Sequence
MSTVEASSSTTSKAVHPSWTAFLDNLESADVDRAIIEENLEFIKQFVRDYEQNKPTPKKT
TRRFPPPPATGKHRRSHGANGSVSGTSPLSPKQHRPPPPPVRPAQKPPTLQDRARLYSDG
KPDRAAATSDGRGGIESVPEAESGPRYIYYRLYVADGPLESVNPIYSNDRFISRILPKSV
APPHTAASLKKYLCRIEGFETAEKCTLFLSLVERVPIEDDTRLSLRAKSGPGLSELEPMA
LIVDTQACHKRSPAPSNPPSEQLDETATRYGTSSILCNRSRRVRLTNKSGEVASKTSFDE
DDSSLGRINMLCVPPPHTVASLKAHLAKAEGASGRSCQLFEDGGGEITMKDDDIIIFLTD
SYPGASEEEPIAVVYSKPRETTSQPTAAVSPLAPRGFSKRIEAVESDLKSETDPLWHSAS
VGEIFHTDGVLRKEVYRGNGLLHCYIAINSSGKMAFIFATKMRFC
Download sequence
Identical sequences B0DC17
29883.JGI294460 XP_001881443.1.58555 jgi|Lacbi1|294460|estExt_fgenesh2_pg.C_130053

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]