SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain assignment for 31234.CRE04972 from STRING v9.0.5

Domain architecture


Domain assignment details

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Strong hits

Sequence:  31234.CRE04972
Domain Number 1 Region: 698-755
Classification Level Classification E-value
Superfamily Acid proteases 0.0000075
Family Retroviral protease (retropepsin) 0.036
Further Details:      
 
Weak hits

Sequence:  31234.CRE04972
Domain Number - Region: 205-251
Classification Level Classification E-value
Superfamily Retrovirus zinc finger-like domains 0.0977
Family Retrovirus zinc finger-like domains 0.0046
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) 31234.CRE04972
Sequence length 1420
Comment (Caenorhabditis remanei)
Sequence
MASSLFIARSVMILKSLESLITEKEVCGNFCDDFGSVFSINNAVIKLEESYRGEQVESRS
ISLCACVSTAILYKSWKEFKTNLVPGEISILLTMSSVTSRSRHSSVSTEMSYRGDENNSK
SPRRSMSVNSAKDVFRDAEAQSFNAGPSAITNGSGRALSFPQIFEPRPDVASTVHQTFGD
RLSGAVLSNVPASAVRNPAIPSEARISCPICSGGHDDYACESPLRSRYCAKNDLCFLCTS
ESHKTQECPLNYLEISKNVVNISLKPGATIGDKIKCSGNPSSESTEQTQSVVDSEKDYRY
LSYHDLVTVLPQFNADPIKYGKFARCFDRLVMKNPRLDHLLKLSLLETKLVGKAKRFIVD
LIDPRAALEATFKALRDEFEEDNYSVVNEIRARFENLTFHETDYKRATLELQDCKSLILQ
LEELKEDVSSTSFVRELSRKLPREAFKRLRSLNANGQTPTTEQVIETFSEYLKENRFYER
FCPWVQEDSSKIHEESVMITIEGSTSPPPRRSGKKRNSKKFSRGAGFNTDATAMPEYSHV
SSSSTKNRKTKGKGKKNSSGAKNQKPLVSSVAGAETKRQEFANYGRIVTAPLTPSKELGR
QLAHSSKARQDSEFSQSNNQNRVSEAHLKSETSLIPLDSVKTVSNRVSRSMKKVLDDPLS
HRARSKLLPQTLVNEFYEASGVKEEKDCSHLPFLALRTTKGKVVLALVDTGASCSFVSQT
CAKRLGLSPIGYRTAVIKGVSTTTTERMSMYRLSFATTGNPVEFFVSGRSRFPETKFFRP
RFGATDNDFLRERYIDPKVITKDRASNGRALEMIIGNDMLARILGNSIRALLPSGRYVEF
TPFGSIIFPAPRVIQFNPLIVSTATSRFHPANSISLVDPNPGNIDRAPSSPQVQSGSTDN
NDGSIAVRRSRQIANLDLSLISKNHHGIRGRNFVSQQGNCNTIGLGNPRHGTVNRQTKGE
KPRMLKCTEEIFLLDASDGSSTIRYMEPRKTQEKDMMKCSLMEEHRVTTEFQRVSVGNRV
FECILKEFKICTNPEVMSHERSFDYFDSLAVYPRDNNLVLEQVELSKDYRGFHPQYYNGK
RSLLSENQFQTGISDRKEVIQKVHRVREKLDNGRTHVLKYQYLDAGRSGASLVRDLTASP
APDACRSGTSEEGVLRKLTSMDACRSGAPKGRKFITTDNSGQTSDKYAASSDPPGRRVGL
KSYCFVPTIESFDTVSDVAASRSGAARGGIECLTPVPDVCRSDTPGKGFNRAVPNLDAGR
SDASTKESDESAPNLGIRQSSSHRRRFGLKSYCFVPTIESYDTVSDVVAGRSDTTPKDTK
QFNPTLGACRSGASKSKDDQKSSGSEYSPNVKLRRPRTIDDWAKIRLPTHRVRPYQPRKP
KAKLARYVLITQAAEPQTPRSVDSCQVPDQASVTLQTKMH
Download sequence
Identical sequences E3MN94
31234.CRE04972 CRE04972 XP_003102416.1.11157

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