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Domain assignment for 314565.XC_3509 from STRING v9.0.5

Domain architecture


Domain assignment details

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Strong hits

Sequence:  314565.XC_3509
Domain Number 1 Region: 101-317
Classification Level Classification E-value
Superfamily MurD-like peptide ligases, catalytic domain 3.92e-70
Family MurCDEF 0.00000249
Further Details:      
 
Domain Number 2 Region: 319-467
Classification Level Classification E-value
Superfamily MurD-like peptide ligases, peptide-binding domain 2.38e-43
Family MurCDEF C-terminal domain 0.00000722
Further Details:      
 
Domain Number 3 Region: 17-102
Classification Level Classification E-value
Superfamily MurCD N-terminal domain 5.36e-28
Family MurCD N-terminal domain 0.0000675
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) 314565.XC_3509
Sequence length 477
Comment (Xanthomonas campestris 8004)
Sequence
MIRRLQDSGDLVRAFPRVHFVGIGGTGMSGIAEVMLTLGYEVSGSDNADNAATRRLAKLG
ARVMRGHSAANVLGTDCVVVSSAIREDNPELMEARSQRIPIMPRAAMLAELMRFRRGIAV
AGTHGKTTTTSLAAAVLSEGGLDPTFVIGGQLLAAGANAKLGGGQWLVAEADESDGSFLR
LNPLMAVITNIDADHLENYGNDFARVQAAFAEFLQRLPFYGLALLCIDDPEVAALAGKTP
RHVMSYGMSENADVRAEDVVQDGPRMRFTLRLPEGTTTPVTLALPGRHNVLNALAAAAIG
WQLGVAPDTIARALENFAGIGRRFNDLGEVTTASGARVRVVDDYGHHPRELEAVFAAARG
GWPDKRLVVAFQPHRYSRTRDQFDAFAAVLSTVDALVLSEVYPAGEAPIPGADSRALARA
IRARGRSEPVVVGQVAGLSEVLPDVLQDGDLLLMMGAGDIGYVAQQIVTDGFVGAPA
Download sequence
Identical sequences A0A0D0KJ91 B0RVA4 G0CDA6 Q4UQX1 Q8PCJ9
gi|66769810|ref|YP_244572.1| gi|188993025|ref|YP_001905035.1| NP_636117.1.47755 WP_011035963.1.10627 WP_011035963.1.12496 WP_011035963.1.15229 WP_011035963.1.16446 WP_011035963.1.1732 WP_011035963.1.18295 WP_011035963.1.1936 WP_011035963.1.22538 WP_011035963.1.25266 WP_011035963.1.27778 WP_011035963.1.31612 WP_011035963.1.36111 WP_011035963.1.36449 WP_011035963.1.40219 WP_011035963.1.40437 WP_011035963.1.43481 WP_011035963.1.4502 WP_011035963.1.475 WP_011035963.1.56666 WP_011035963.1.80866 WP_011035963.1.82601 WP_011035963.1.88278 WP_011035963.1.89271 gi|21230200|ref|NP_636117.1| 190485.XCC0726 314565.XC_3509 509169.xccb100_3630 gi|384426570|ref|YP_005635927.1|

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