SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for 316275.VSAL_I0074 from STRING v9.0.5

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  316275.VSAL_I0074
Domain Number 1 Region: 9-213
Classification Level Classification E-value
Superfamily Formyltransferase 4.19e-66
Family Formyltransferase 0.000000125
Further Details:      
 
Domain Number 2 Region: 214-316
Classification Level Classification E-value
Superfamily FMT C-terminal domain-like 7.53e-33
Family Post formyltransferase domain 0.0000353
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) 316275.VSAL_I0074
Sequence length 321
Comment (Aliivibrio salmonicida LFI1238)
Sequence
MMTEVNLNKPLRIIFAGTPDFAARHLAALLDSHHEIIGVYTQPDRPAGRGKKLTASPVKE
LALKHAIPVFQPENFKSDDAKQELADQNADLMVVVAYGLLLPQAVLDTPKLGCINVHGSI
LPRWRGAAPIQRSIWAGDAETGVTIMQMDIGLDTGDMLNITTLPIEATDTSASMYNKLAE
LGPIALVNCLSDIANGNALAEKQNDEKANYAKKLSKEEAKIDWTMDAETIERCVRAFNPW
PMSHFSVDDKAIKVWQSRVETYEGDATPGTIIQADKTGIYVATSSNAIVFEQLQVPGKKA
MGVQDILNSRKEWFEVGNTLN
Download sequence
Identical sequences B6EP20
316275.VSAL_I0074 gi|209693698|ref|YP_002261626.1|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]