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Domain assignment for 3218.JGI100015 from STRING v9.0.5

Domain architecture


Domain assignment details

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No Significant Hits.

Weak hits

Sequence:  3218.JGI100015
Domain Number - Region: 277-317
Classification Level Classification E-value
Superfamily Retrovirus zinc finger-like domains 0.0235
Family Retrovirus zinc finger-like domains 0.0069
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) 3218.JGI100015
Sequence length 901
Comment (Physcomitrella patens)
Sequence
MDPSIASMFQAFSLSMQQQQSNDRQEALATKALQAVVNKIDQFDSRNISRYLRCYVREME
LNQVSEKKMVELFGLTTMPEIRDHIASITDRYGNSWEVFSHALKDKYFLEDADRVTKKLF
LEWIERPNKNLQATELLKEFERQYSQLSKVEKLTLEPNKVALFLQAADGELQEKLEPLLE
DKEEDEGLTTKWKNVEDAVRLLTKKERRKDRSNIPKPVQAPKAPVRTTPSTMPIVQPSTS
LSKKADMGMEEIICGMRALQIKLARLEENTSINNSKNVSKQGYVQRCIWCDDASHTRKDC
NEFNNMIRQGIICWKGGKIALKDREDLLRTNFGKGGMRALVQDYLKEHETVVRESVSYGA
RVDDEIGGSTETSWEDPVESLSVHGYIAKSQHEALMEEKRRGNFDDIREGNSFKRQTRGD
KAREAASQELPVKDTSASLGEKTTETKDKGKSIAYKLLSDIEAATNLKGVVEECILNAKE
EFTLKEVLRIAKKEFHDVIIDSIKRKRQLISETGMSHAIDARICRDEEEVDIGYKQPTNE
KNGYNQRVRFEDSSNKGMETLSHYTRKHWARATTEVLVKVGDIEEPIVALVDHDVKIRIG
DVATEQHFFVQDTTSCPLILGQPYITATRMETKRDYGGTKEEVLSQDEGAFDASFIGILG
NGNIIYKKVDDFKRKERKRLYDIEGQLRKIGTLQDDERILGVYEENGLEDSLELITSIGL
GDNDKIVEIHSREVYTMLESFQAPEVTVETRYKTADKKIKLVAGPLPEDSKEQMGEASKE
ASLRDPMSIGHQFTEETFEELKIGSDGSLLSEEITCFKKMLAKQDRSFAFESHEIGCVNP
NIITPMVIFTVPHVTTGIFTNIGPELVGRLNVVPITGFDSVSGCPVLCAVSGNVVYGKWI
S
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Identical sequences A9U0T6
3218.JGI100015 jgi|Phypa1_1|100015|fgenesh1_pg.scaffold_406000019 XP_001784461.1.60028

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