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Domain assignment for 3218.JGI100265 from STRING v9.0.5

Domain architecture


Domain assignment details

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No Significant Hits.

Weak hits

Sequence:  3218.JGI100265
Domain Number - Region: 533-572
Classification Level Classification E-value
Superfamily Retrovirus zinc finger-like domains 0.0241
Family Retrovirus zinc finger-like domains 0.0069
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) 3218.JGI100265
Sequence length 966
Comment (Physcomitrella patens)
Sequence
MDETGMSHAIDVRICRDEEEVDIGYKQPTNEKNGYNQRVRFEDYSDKEIETLSHYTQKHW
TRVTTEVLVKVGDIEEPIVALVDHGSEINLMSKDLYKKQKWPIDMEHGWAIRAANNTWGE
QHFFVQDTTSYPLILGQPYITATRMETKVLDDGSAYARNRDRLREKPLPKIVEGFKDFGE
LPRILGATTNSSANTERLGSVTPLQLFRPLCHSGNVLSVKRSLKAQILSGQVQSPRYSQP
GHTEMLRSIPITGVSGKRRTNSHDRFEEPIGSLKGFLGGVSGGESSKGQGMHMDPSIDSM
FQAFSLSMLQQQSNDRKEALATKALQAVVNKIDQFDGRNISRYLRCYVREMELNRDSEKK
MVALFGLATIPEIRDHITSITDRYGNSWEDFSYALKDEYFLEDVDRVTKKLFLGWIERPN
KNLQVTELLKKFERQYSQLSKVEKLTLEPNKVDLFLQATNGELKKDRSNISKTIQAPKAP
VCTTPLTMPTVQPSTSLSKKADMGMEKIIRGIRDLQIKLARLEENTSINNSKNVSKQRYV
QRCIWCDDASHTRKDCNEFNNMIRQGIICWKDGKIALKDREDLLQTNFGKGGMRALVQDY
LKEHETVVRESTSYGARVDDEIGGSTETSEFWASTVSTMQEGKLPREALLRTAATIRRRA
GWEDLVESLSVHAYIAKSQHEALMEEKRRGNFDDTREGNSFKRQTRGDKAREEASQELPV
KDTSASLGEKTTETKDKGKSIAYKLLSDIEAATNLKGVLDERILNAKVEFTLKEVLRIAK
KEFHDVIIDSIKRKRQLMSETGMSHAIDVRICRDEEEIDIGYKQPTNEKNGYNQRVRFED
SSDKEMETLSHYTRKHWARATTEVLVKLPRILGASTNSSANTEWSGSVTPLQSAGGTLFA
VNGSLKGKNEGEGLDDVLRIKGTEEELHGSGRRRKDEELDFSSSQSFGKSEAIVAEVSVV
MVNRDF
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Identical sequences A9U193
XP_001784624.1.60028 jgi|Phypa1_1|100265|fgenesh1_pg.scaffold_414000011 3218.JGI100265

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