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Domain assignment for 3218.JGI101963 from STRING v9.0.5

Domain architecture


Domain assignment details

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No Significant Hits.

Weak hits

Sequence:  3218.JGI101963
Domain Number - Region: 271-307
Classification Level Classification E-value
Superfamily Retrovirus zinc finger-like domains 0.0523
Family Retrovirus zinc finger-like domains 0.0064
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) 3218.JGI101963
Sequence length 1500
Comment (Physcomitrella patens)
Sequence
MENENKNFEGFLGGVSDRESSKGQGMHMDPSIASLIQAFSLSMQQQQSNDRKEALATKAL
QAVVNKIDQFDGRNISRYLRCYVREMELNRVFEKKMVALFGLATIPEIRDHITSITDCYG
NSWEDFSHALKDEYFLEDADRVEKLTLEPKKVDLFLQAADKKLQEKLESLLEDEEEDERL
TTKWKNVEDAVGLLTKKERRKGRSNIPKTVQALKAPVCTIPPTMPTVQPSTSLSKKADMG
MEEIIRGMRDLQIILARFEENTSINNSKSVSKQGYVQRCIWCNNASHTRKDCNEFNNMIR
QGIICWKDGKIALKNREDLLQTNFGKGGMRALVQDYLKGYETVARESASYGARVDDEIGG
STETSELWASAVSTMQEGKLPREALLRTAATIRGRTEKRRGNFDDTREGNSSKRQTRGDK
AQEAASEELPVKDTSASLEEKTMEIKDKGKSIAYKLLSHIEAATNLKGVLEERILNAKVE
FTLKEVLGIAKKEFHDVIIDSIKRKRQLMSETGMSHAIDARICRDEEERVRFEDSSDKEM
ETLSHYTRKHWTRATTEVLVKVGDIKEPIVALIGHGSEINLMSKDLYKKQKWPIDMEHGW
AIRAANNTRGELYGAFPDVKIRIGDVAMEQHFFVQDTTSYPLILGQPYITATRIETKVLD
DGSAYARVWSEDRRKAVQFLTVPPNHERNRDRLREKPLPKIVEGFKDFREIGTLQDDERI
LGVYEENGLEDSLELITSIGLGDNDKIVEIHSREVYTMLESFQAPEVTVEARYKMADKKV
KPVAGPLPKDSKEQMGEASKEASLRDPMSIGYQFTEETFEELKIGFYGSLLLEEITCFKK
MLAKQGRLFAFESHEIGCVDPNIITPIVIFTVPHLPRILGASTNSSVNTEWSGSVASLQL
AGHTEMLRSISITGVSRKRRANSHDGFKEPIGSNFENPIRQQQSNDRKEALATKALQAVV
NKIDQFDGRNISRYLRCYVREMELNRVSEKKMVALFGLATIPEIRDHITSITVHCGNSWE
DFSHALKDEYFLEDADRVTKKLFLGWIERPNKNLQATELLREFERQYSQLSKVEKLTLEP
NKVDLFLQAADGELQEKLKPLLEDKEEDEGLTTKWKNVEDAGIIYWKDGKIALKDREDLL
QTNFGKGGMRALVQDYLKGYETVARESASYGARVDDEIGGSTETSEFWASAVSTMQEGKL
PREALLRTAATIRGRTEKEILLRGKLEDKAREAASQELPVKDTSASLGEKTTETKDKGKS
IAYKLLSDIEAATNLKGVLEERILNAKVEFTLKEVLGIAKKEFHDVIIDSIKRKRQLMSE
TGMSHAIDARICRDEEERVRFEDSSDKEMETLSHYTRKHWVRATTEVLVKVGDIEEPIVA
LVGHGSEINLMSKDLYKKQKWPIDMEHGWAIRAANNTRGELYGACPDVKIRIGDVATEQH
FFVQDTTSYPLILGQPYITATRIETKVLDDGSAYARQEDESDMDNEGDEDELDKDVGDIF
Download sequence
Identical sequences A9U4G0
XP_001785746.1.60028 jgi|Phypa1_1|101963|fgenesh1_pg.scaffold_513000002 3218.JGI101963

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