SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for 3218.JGI102732 from STRING v9.0.5

Domain architecture


Domain assignment details

(
show help)

No Significant Hits.

Weak hits

Sequence:  3218.JGI102732
Domain Number - Region: 22-61
Classification Level Classification E-value
Superfamily Retrovirus zinc finger-like domains 0.0149
Family Retrovirus zinc finger-like domains 0.0075
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) 3218.JGI102732
Sequence length 469
Comment (Physcomitrella patens)
Sequence
MRDLQIKLARLEENTSMNNSKNVSKQGYIQRCRWCDDASHTRKDCNEFNNMIRQGIICWK
DGKIALKDREDLLQTNFGKGGMRALVQDYLKEHETTARESASYGARVDDEIGGSTKTSEF
WASAVSTIQEGKLPREALFKTTAIIRGKTGWGDPVESLSVHAYIAQSQHEALMEEKRRGN
FDDTREGNSSKRQIRGDKAREVASQELPVKDTSSSLGEKTKETKDKGKSIAYKLLSDIEA
ATNLKGVLEERILNAKQEFTLKEVLGIAKKEFHDVIIDSIKRKRQLMGETGMSHAIDARI
YRDEEEVDIGYKQPTNEKNGYNQRVRFEDSSDKEIETLSHYTRKHWARATTEVLVKVGNI
DEPIVVLVDHGSEINLMSKDLYKKQKWPIDMEHGWAIRAANNTRGELYGACPHAVLFSVP
FQGTLFSVKRSLKGKNGGESFDGESQFWIQALTVGANPDPRWRIEEIQN
Download sequence
Identical sequences A9U5L6
XP_001786151.1.60028 jgi|Phypa1_1|102732|fgenesh1_pg.scaffold_714000002 3218.JGI102732

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]