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Domain assignment for 3218.JGI159109 from STRING v9.0.5

Domain architecture


Domain assignment details

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No Significant Hits.

Weak hits

Sequence:  3218.JGI159109
Domain Number - Region: 607-629
Classification Level Classification E-value
Superfamily Retrovirus zinc finger-like domains 0.00872
Family Retrovirus zinc finger-like domains 0.0066
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) 3218.JGI159109
Sequence length 813
Comment (Physcomitrella patens)
Sequence
MLKEAFPLLVDEVGIHETVTASEEPEAQVSVAKPPSTRPRLPVIFNRLKTKPRLKAVKQY
LASFEYWLKLQTNFNSQKQRPLLQITETAKTISFPVFCIDMKQYEELPEKLPQPVLSRDM
STFIQEPLVWFEYNVFPKLTFWEADCQCTTAHQAGLPDVERFPLSFQTVLDGQVYQHIVL
LVQYFSKYGAFGISRWPEFGSIDLEFNSMAGVVNNYKTAYEEQGHVVEKIRLGLPVEHNL
KSKNFVCWRYLELDLEVQPWSECVQEINFFAAKAKRLWEIWVRSGKGEDPRQIYIRQTKR
LLASRESSPPKTKRLNLDSGLTVPELSSEVAAEGVENTGILELTETPSIESGEVTGNALI
ISKDAKEVSPRVLPRDLCSNDTRVAVRSPTNHGFCELRKIKKWIKICSVRSKHAAIRSVK
SKRPMKDTSSLPRSARNSIEQPLAVSRCLFGINYSSGTPGIDGSKTFWECLRALYQSKNE
ARLLLLKNKLADIRMEGPLVEESYRVVQDIFQQLVGIGEAIERRLHGFEETINSLSENFD
AAVQNVDSQQLLHSLKQISQQLVEVQSGELQPITILKKEKKNIIPARKITSRKLDPRSSS
RIQYCLPPCNWCRQHGHRMRDCEDLDKEIKRRVREYKNRMSPTSPKNSQEEPNHTELATE
AEVRSSEFTGKPDTSLEKSKQSKISEEAGGPSEWKTPIEVASQGPASFRSGRNGGKKEEV
VSKEIGHEIDALVRETSQRVRRTREGIQDHDSKKDTPTEKVLIGTGFGTDGKRQIIDIGG
HKPTRGVIDSCVTAHMCLAACDNSSGLKRHCRY
Download sequence
Identical sequences jgi|Phypa1_1|159109|estExt_fgenesh1_pg.C_90200 XP_001753566.1.60028 3218.JGI159109

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