SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain assignment for 3218.JGI160751 from STRING v9.0.5

Domain architecture


Domain assignment details

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Strong hits

Sequence:  3218.JGI160751
Domain Number 1 Region: 519-750
Classification Level Classification E-value
Superfamily Voltage-gated potassium channels 0.0000000000243
Family Voltage-gated potassium channels 0.017
Further Details:      
 
Weak hits

Sequence:  3218.JGI160751
Domain Number - Region: 404-476
Classification Level Classification E-value
Superfamily EF-hand 0.000325
Family Calmodulin-like 0.063
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) 3218.JGI160751
Sequence length 880
Comment (Physcomitrella patens)
Sequence
MDINQDEKMKDKVFEGYDLDLGVPLLSDSEIIDKPNDQEDITEGTVSDCHNASQPSVVPM
AAALVEQARNLQAHDLSSLSYAMQGRWMPVEVVQHRNFARAKQSFLLYHRLYPLRAVSIF
VLLVLPCFEIFPRSHKLTYQECTLRSSSDSCSPSSRGVLQIPVWCQGQLPYPCGDPMKYQ
LSGLPYIERWQSLLVESILILISDDEVRVHTQARVSALGLCLAMLTCSVALQFYYMGSSF
WNYSSATFKMVLLSALILSAAATAVGELEVFQLSMYLRVLVPIVFTRSLRVCFRMTIRIM
HTFADIAMLLGLFVLLSAYLATLIFRDTISEYEDYRTALLNLFVLLTTANNPNVWAGAYT
FDRRAFFFFFTYLVVGLFFLMNLVFTVIYSNYKAQMVNEVEKRTTARQQCLRAAFRILDV
RQQNWIDGATMTALLHAMSSYSQIPDFRNNTHEVFLALDKRGDFRIWQDEFEGLCDVIAI
EIERKSRKHRMPRSRVAELSRVITETRLISEPVHDLIFWILTLASVLVAFFGSQVVSSHI
KNQLIVSEIVLVCVFMVDAFLKIFSEGWTSYWRKSLNQYDFLLTCSTTIIQTAAYFHLVE
QHWVSILLLARGLRLFCFMRFVSRWNLMIQTIIHLIPATAPVVALQLIVCTLFSLAGVHL
FGGKVYLGNRLLEDTDYATGQLYAFNYNDYGSAMVTSFNLCIVNNWYVFMDAYAVATGTP
WSRVFFIFFWAVAVAFTLNVVVAFVVEAFVFRMEKAEAQKNSPSLSRSRSRSESPSHVRG
KRRALGRMPHIYSCYDLYEDMAVKSNATGPATVKAYQCFCDTPYSSLRSSYKEVRNCSFH
SVLTAQLNVAHSRDAQRWHDAECVEKLLMKLDQLSQIFRA
Download sequence
Identical sequences A9RSH5
XP_001756965.1.60028 jgi|Phypa1_1|160751|estExt_fgenesh1_pg.C_250205 3218.JGI160751

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