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Domain assignment for 3218.JGI65954 from STRING v9.0.5

Domain architecture


Domain assignment details

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No Significant Hits.

Weak hits

Sequence:  3218.JGI65954
Domain Number - Region: 179-217
Classification Level Classification E-value
Superfamily Retrovirus zinc finger-like domains 0.0243
Family Retrovirus zinc finger-like domains 0.0069
Further Details:      
 
Domain Number - Region: 361-455
Classification Level Classification E-value
Superfamily YwmB-like 0.0262
Family YwmB-like 0.036
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) 3218.JGI65954
Sequence length 780
Comment (Physcomitrella patens)
Sequence
MKIKILKDFWEEFLVGILLKNKVCTWIRLLLVCFKPSHYQCSNSKAMIKRKLWQPKHCKQ
WSIKLINLIGRIFQEKLELLLEDKEEDEGLTTKWKNVEDAVGLFTKKERKKDRSNIQKTV
KAPKAPVHTTPPTMPTVQPLTSLSKKADMGMEEIIQGMQDLQIKLARLEENTSTKNSKNV
SKQGYVQRCIWCDDASHTRKDCNEFNNMIRQRIICWKDGKIALKNREDLLQTNFGKGRMR
ALVQDYLKEHEIAARESTSYGARVDDDLGGNMETSEFWASAVSTMQEGKLPREALLRTAA
TIRGRTDWKDPVESLLVHAYIAKSQHEALMEEKRRGNFDDTREGNSSKRQTRGDKAREAA
SQELPVRDTSASLGEKTKETKGKSKSIAYKLLSDIEAATNLKGVLEERILNAKVEFTLKE
VLGIAKKEQLMSETGMSHAIEGRIYKDEEEVDIGYKQPTNEKNGYNQRVCFKDSSVKEMK
TLSHYTRKHWARATTEVLVKVGDIEEPIVALVDHGSEINLMSKDLYKKQKWPIDMEHGWA
IRAANNTRGELYGACPNRDYGGTKEKVLSRDEGTFDVSFIGILENGNIMYKKVDDFKRKE
RKRLYDIEGQLRKLGTLQDDERILGVYEENGLEDSLELITSIGLGDNDKIVEIHSREVYT
VLESFQAPEVTVETRYKTTDKKVKPIVGPLPEDSKEQMREASKEVSLSDPMSIGHQFTKE
TFEELKIGSDGSLLPEEITCFKKMLAKQGRSFAFESHEIGCVDPNILTPMTDSSTEDTFT
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Identical sequences A9RGW2
jgi|Phypa1_1|65954|fgenesh1_pg.scaffold_8000156 3218.JGI65954 XP_001753282.1.60028

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