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Domain assignment for 3218.JGI66882 from STRING v9.0.5

Domain architecture


Domain assignment details

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No Significant Hits.

Weak hits

Sequence:  3218.JGI66882
Domain Number - Region: 46-84
Classification Level Classification E-value
Superfamily Retrovirus zinc finger-like domains 0.0209
Family Retrovirus zinc finger-like domains 0.0069
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) 3218.JGI66882
Sequence length 685
Comment (Physcomitrella patens)
Sequence
MPTVQSSTSLSKKTDMGMEEIIRGMRDLQIKLARLEENTSINNSKNVSKQGYVQRCIWCD
DASHTRKDCNEFNNMIRQRIICWKDGKIALKDREDLLQTNFGKGGMRALVQDYLKRHETV
ARESASYGARVDDEIGGSTETSEFWASAVSTIQEGKLPREALLRTAATIRGRTVHAYIAK
SQHEALMEEKRRGNFDDTREGNYFKRQTRGDKAREAASQELPVKDTSASLGEKTTETKDK
GKSIAYKLLSDIEAATNLKGVLKERILNAKVEFTLKEVLEIAKKEFHDVIIDSIKRKRQL
MSEIGMSHVIDARICRDEEEVDIGYKQPTNKKNGYNQRVRFEDSSDKEMETLSHYTRKHW
ARATTEVLMKVGDIEEPIVALVDHGSEINLMSKDLYKKQKRPIDMEHGWAIRAANNTRGE
LYGACPDVKIRIGDVATEEHFFVQDTTSYPLILGQPYIMATWMETKVLDDGSAYARVRSE
DGRKVVQFLTVPPNHEWNRDRLREKPLPKIVEGFKDFGELRKIGTLQDDERILGVYEENG
LEDSLELITSIGLGDNDKIVEIHSREVYTMLESFQALEVTIETRYKMADKKVKPVAGPLP
EDSKEQMGEASKEASLRDPMSIGHQFTEETFEELKIGSDGSLLSEEITCFKKMLAKQEIP
QQEDESDMDNEGDEDELDKDVGDIF
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Identical sequences A9RJB0
XP_001754120.1.60028 jgi|Phypa1_1|66882|fgenesh1_pg.scaffold_12000167 3218.JGI66882

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