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Domain assignment for 3218.JGI70039 from STRING v9.0.5

Domain architecture


Domain assignment details

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No Significant Hits.

Weak hits

Sequence:  3218.JGI70039
Domain Number - Region: 394-432
Classification Level Classification E-value
Superfamily Retrovirus zinc finger-like domains 0.023
Family Retrovirus zinc finger-like domains 0.0069
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) 3218.JGI70039
Sequence length 699
Comment (Physcomitrella patens)
Sequence
MWSRLRGSILFQAVLFSVPSQGTLFSVNGFLKGKNGGESLTTRANFGSKLQASASSQKLI
DCLTIGESPYYLLQPDARRYWISVDFIFIFMENENKNFEGFLGEVSGGESSKGQGMHMDP
SIASLFQAFSLSMLQQQSNDRKEALATKALQAVVNKIDQFDGRNISRYLRCYVREMELNR
VSEKKMVELFGLVTIPEIRDHITSITDHYRNSWEVFSHALKDEYFLEDVDRVTKKLFLEW
IERSRKNLQAIELLREFERQYSQLSKVEKLTLEPNKVDLFLQAADGELQGKLELLLEDKE
EDEGLTTKWKNVEDAVGLLTKREKRKDRSNIPKTVQAPKAPIRTTPPTMPTVQPSTSLSK
KADMGMEEIIRGMRDLQIKLARLEENTSTNNSKNVSKQEYVQRCIWCDDASHTRKDCNEF
NNMIRQGIICWKDGKIALKDREDLLQTNFGKGGMRALVQDYLKEHETAAPESASYGARVD
DEIGGSTETSEFWASAVSTMQEGKLPQEALLRTAPTIRGRTDEEEVDIGYKQPTNEKNGY
NQRLRKIGTLQDDERILGVYEENGLEDSLELITSIGLGDNDKIVEIHSREVYTMLESFQA
PEVTVETRYKTVDKKVKPVAGPLPEDSKEQMREASKEASLRDPMSIRHQFTEETFEELKI
GSMVLYYRRKLLASKRCWLNKVDRLPSNLMKLGVWIQIL
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Identical sequences A9RSN7
XP_001757104.1.60028 jgi|Phypa1_1|70039|fgenesh1_pg.scaffold_26000040 3218.JGI70039

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