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Domain assignment for 3218.JGI70549 from STRING v9.0.5

Domain architecture


Domain assignment details

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No Significant Hits.

Weak hits

Sequence:  3218.JGI70549
Domain Number - Region: 357-444
Classification Level Classification E-value
Superfamily Acid proteases 0.00234
Family Retroviral protease (retropepsin) 0.052
Further Details:      
 
Domain Number - Region: 46-76
Classification Level Classification E-value
Superfamily Retrovirus zinc finger-like domains 0.0419
Family Retrovirus zinc finger-like domains 0.0069
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) 3218.JGI70549
Sequence length 692
Comment (Physcomitrella patens)
Sequence
MPTVQPSTSLSKKAGMGMEEIIRRMRDLQIKLARLEENTSTNNSKNVSKQGYVQRCIWCD
DASHTRKDCNEFNNMIRQGIICWKDRKIALKDREDLLQTNFGKGGMRALVQDYLKEHEIV
VRESASYGARVDDDLGRSTETSEFWASVVSTIQEGKLPREALLRTAATIRGRKGWEDPVE
SLSVHAYIAKSQHEALMEEKRRGNFDDTREGNSSKRQTGGDKAREAASQELPVKDTSASL
GEKTMETKDKGKSIAYKLLSDIEAATDLKVVLEEHILNAKVEFTLKEVLGIAKKEFHDVI
IDSIKRKRQLMGETGMSHAIDARIYKDEEDVDIGYKQPKNEKNGATIEVLVKVRDIEEPV
VALVDHGSEINLMSKDLYKKQKWPIDMEHGWAIQAANNTRGELYGACPDIKIWIGDVATE
QHFFVQDTTSYPLILGQPYITATRMETKVLDDGSAYRDYGGTKEEVLSRDEGAFDASFIG
ILENRNIMYKKVDDFKRKEKKRLYDIEGQLRKLGTLQDDERILGVYEENGLEDSLGLITS
IGLGDNDKIVEIHSREVYTILESFQAPEVTVETRYKMVDKKIKPVAAPLLEDSKEQMGEA
LKEASLRDPMSIGHQFTKEIFEELKIGSDGSLLPEEVTCFKKMLAKQGRSFPFESHEIGC
VDPNIITPMVIFIVPHVPWNLRPILVSRAHLP
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Identical sequences A9RU10
XP_001757523.1.60028 3218.JGI70549 jgi|Phypa1_1|70549|fgenesh1_pg.scaffold_28000154

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