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Domain assignment for 3218.JGI70804 from STRING v9.0.5

Domain architecture


Domain assignment details

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No Significant Hits.

Weak hits

Sequence:  3218.JGI70804
Domain Number - Region: 500-589
Classification Level Classification E-value
Superfamily Acid proteases 0.0105
Family Retroviral protease (retropepsin) 0.04
Further Details:      
 
Domain Number - Region: 235-273
Classification Level Classification E-value
Superfamily Retrovirus zinc finger-like domains 0.0314
Family Retrovirus zinc finger-like domains 0.0069
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) 3218.JGI70804
Sequence length 1176
Comment (Physcomitrella patens)
Sequence
MDPSIASMFQAFSLSMQQQQSNDRMKALATKALQAVVNKIDQFDGKNISRYLRCYIREME
LNRVSEKKMVELFGLATIPEIRDHITSITDRYEDSWEIFLHALKDKYFLEDAHRPNKVDL
FLQAADGELQGKLELLLEDKEEDEGLTTKWKNVKDAVGLLTKRERKKDRSNIPKRVQAPK
APVRTTPPTMPTVQPSTSLSKKADMGMEEIIRGMRDLQIKLARLEENTSTKNLKNVSKQG
YVQRCIWCDDASHTRKDCNEFNNMIRQGIICWKDGKIALKDRDDLLQTNFGKGGMRALVQ
DYLKEYETAARESASYGARVDDEIGGSTKTSEFWASAISTIQEEKLPREVLLRTAATIRA
SLGEKTKEIKDKGKSIAYKLLFDIEAATNLKGVLEEHILNAKVEFTLKEVLGIAKKEFHD
VIIDSIKRKRQLMGETGMNHAIDARIYRDEEEVGIGYKQPTNEKNGYNQRVCFEDSSDKE
METLSHYIRKHWARATTEVLVKVGDIEEPIVALVDHGSEINLMSKDLYKKQKWPIDIEHG
WAIRAANNTQGELYGACPDVKIRIGDVATEQHFFVQDTTSYLLILGQPYIAAAWMETKVL
DDGSAYARVRSEDGRKAAQFLTVPPNHERNRDRLREKPLPKIVEGFKDFGEIIEIHSREV
YTILESFQAPEVTVETRYKTADKKFTRETFEELKIGSDGSLLPEEITCFKKMLAKQDRSF
AFKSHEIGYLEYWEQQPTPVQILSGQVQSPRYSQSGHTEMLRLILITGVSRKGKDQFTRR
SNYGKIQVLLRASANLTRRTNVIQLREHPGLTTGLLANMRPELVGRLNVVPIAGFGFCFR
LSYSLCRFRERYFRQTPGAFSSRKARNTIAVGSYGYSILNKFVQVGDGNLDEKSLDNKKV
FSTFERSKDVLPNTLNYVEEFKVEPLQKMDYESIEGYNHEDCMNSQHYDVRSGGIMHGSD
DESQIAYGYETTYELGERSYEFPHEEGYVIAQAYDTKCGCETTKDYFESYETFQEHEISK
GHENFQYYEVIQCFETTKDYDVSEGCIQEDMKDVIQDYVANKDYGIKDKDAKSLTMIKLI
MSTSLLDQGQTYIDNVHVMGTQLDFDKDKIHHEVWNSRVENLKNFKYNDMENGFKDYMDI
LNGTWNQRNKKNDTRKMYVAMRKRFQFNLFISNFVH
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Identical sequences A9RUQ4
jgi|Phypa1_1|70804|fgenesh1_pg.scaffold_29000171 XP_001757850.1.60028 3218.JGI70804

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