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Domain assignment for 3218.JGI71480 from STRING v9.0.5

Domain architecture


Domain assignment details

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No Significant Hits.

Weak hits

Sequence:  3218.JGI71480
Domain Number - Region: 277-317
Classification Level Classification E-value
Superfamily Retrovirus zinc finger-like domains 0.0256
Family Retrovirus zinc finger-like domains 0.0069
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) 3218.JGI71480
Sequence length 815
Comment (Physcomitrella patens)
Sequence
MDPSIASMFQAFSLSMQQQQSNDRKEALATKALQAVVNKIDQFDGRNISRYFRCYVREME
LNRVSEKKMVALFGLATIPEIRDHITSIKDRYGNSWEVFSHALKDEYFLEVADRVTKKLF
PEWIEWPNKNLQATELLRKFERQYSQLSKVEKLTLEPNKVDLFLQAADGELQEKLEPLLE
DKEEDEGLTTKWKNVEDALELLTKKERRKDRSNIPKTVQASKAPVRTTPPTMPTVQPLTS
LSKKADMGMEEIIRGMRDLQIKLARLEENTSTNNSKNVSKQGYVQRCIWCDDASHTRKDC
NEFNNMIRQGIICWKDGKIAVKNREDLLQTNFGKGRMRALVQDYLKEHETVARESASYGA
RVDDEIGGSTETSEFWASAVSTMQEGKLPRKALLRTAAIIPVHAYIAKSQHEALMEEKRR
GNFDDTREGNPFKRQTRGDKAREATSQELPVGDIDEPIVALVDHGSEINLMSKDLYKKQK
WLIHMEHGWAIRAANNTWGELYGACPDVKIWIRDVATEQHIFVQDTTSYPLILGQPYITA
TQIERKVLDDGSAYARIRSEDGRKVVQFLTVPPNHERNQDRLREKPLPKIVEGFKDFGEE
VLSQDEGAFDASFIGILENGNIMYKKVDDFKRKERKRLYNIEGQLHKIGALQDDERILGV
YEENGLEDSLELITSIGLGDNDKIVEIHSREIYTMLESFQVPEVTVETRYKTADKKVKPV
AGPLLEDSKEQMGEASKEASLRDPMSIGHQFTEETFEELKIGSDGSLLPEEITCFKKMLA
KQGRLSKYCNTYGYLHCTTCTLESKTDFGTKGTFT
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Identical sequences A9RWJ8
XP_001758382.1.60028 3218.JGI71480 jgi|Phypa1_1|71480|fgenesh1_pg.scaffold_32000192

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