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Domain assignment for 3218.JGI74103 from STRING v9.0.5

Domain architecture


Domain assignment details

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No Significant Hits.

Weak hits

Sequence:  3218.JGI74103
Domain Number - Region: 266-304
Classification Level Classification E-value
Superfamily Retrovirus zinc finger-like domains 0.0235
Family Retrovirus zinc finger-like domains 0.0069
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) 3218.JGI74103
Sequence length 826
Comment (Physcomitrella patens)
Sequence
MDPSIASMFQAFSLSMQQQQSNDRKEALATKALQAVVNKIDPFDGRNISRYLRCYVREME
LNRVSEKKMVALFGLATIPEIRDHITSITDHYGNLWEVFSHALKDEYFFEDADRITMKLF
LEWIERPNKNLQYSQLSKVEKLTFELNKVDLFLQAADGELQEKLEPLLEDKEEDEGLTTK
WKNVEDAVGLLTKKKRRKDRSNIPKTLQASKAPVRIIPPTMPTVQPSTSFSKKADMEMEE
IIRRMRDLLIKLARLEENTSTNNLKNVSKQGYVQRCIWCDDASHTRKDCNEFNNMIRQRI
ICWKDGKIALKDREDLLQTNFGKGGMRALVQDYLKEHERSTRKCKLCEFWTSAVSTMQEG
KLPREALLRTAAIIQVHAYIAKSQHEALMEEKRRGNFDDTREGNSSKRQIRGDKAQESAS
QELPVKDTSASLGEKTKETTDKGKSIAYKLLFDIEAATNLKGVLEERILNAKLKFPLKEV
LGIAKKEFHDVIIDSIKRKRIYKEEEEDDIGYKQPTNEKNGYNQRVCFEDYSDKEIETLS
HYTGKHWARVTTEILVKVGDIEEPIVVLVHHGFEINLMSKDLYKKQKWPIDMEHGWAIRA
ANNTRGELYGACPDVKIRIGDVATEQHFFVQDTTSYPLILGQPYITATRMETKVLDDGSA
YARVRSEDLRKAIQFLTVSPNHERNRDRLREKPLPKIIEGFKDFEEEVLSRDEGAFDASF
IGILENGNIMYKKVDDFKRKERKRLYDIEGQLRKIGTLQDDERILGVYEENGLEDSLELI
TSIRLGDKDKIVEIHSREVYTILESFQALEVIVETKRSNEYWTSVY
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Identical sequences A9S3J4
jgi|Phypa1_1|74103|fgenesh1_pg.scaffold_45000117 XP_001760960.1.60028 3218.JGI74103

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