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Domain assignment for 3218.JGI74656 from STRING v9.0.5

Domain architecture


Domain assignment details

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No Significant Hits.

Weak hits

Sequence:  3218.JGI74656
Domain Number - Region: 488-583
Classification Level Classification E-value
Superfamily Acid proteases 0.00337
Family Retroviral protease (retropepsin) 0.049
Further Details:      
 
Domain Number - Region: 253-292
Classification Level Classification E-value
Superfamily Retrovirus zinc finger-like domains 0.0204
Family Retrovirus zinc finger-like domains 0.0069
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) 3218.JGI74656
Sequence length 745
Comment (Physcomitrella patens)
Sequence
MENENKNFEGFLGGVSGGDSSKGQGMHMDPSIASLFQAFSLSMQQQQSNDQKEALATKAL
QAVVNKIDQFDGRNISRYLRCYIREMELNQVSEKKMVALFGLATIPEIRDHITSITDRCG
NSWEDFSHALKDEYFLEDADHVEKLTLEPNKVDLFLQAADEELQEKLESLLEDKEEDEGL
TTKSKDRSNIPKTVQAPKAPVRTIPPTMPAVQPSTSLSKKANMGMEEIIQGMRDLQIKLA
RLEENTSINNSKNVSKQGYVQRCIWCDDASHTRKDCNEFNNMIRQGIICWKDGKIALKDR
EDHLQTNFGKGGMRSMVQDYLKGHETVARESASYGARVDDEIGGSTETSEFWASAVSTMQ
EGKLPREALLRTAATIRGRTGVLEEHILNAKVEFTLKEVLEIAKKEFHDVIIDSIKRKRQ
LIGETRISHAIDARIYRDEEEVDIGYKQPTNEKNGYNQRVCFEDSSNKEMETLSHYTRKH
WARATTEVLVKVGDIEEPIVALVDHGSKINLMSKDLYKKQKWPIDMKHGWAIRAANNTRG
ELYGACPVVKIRIGDVATEQHFFVQDTTSYPLILGQPYITATRMEKKVLDDGSAYARVRS
KDGRKAVQFLTVPPNHERNRDRLREKPLLKIVEGFKDFGEEVLSRDEGAFDASFIGILEN
GNIMYKKVDDFKRKERKRLYDIEGQLRKIGTLQDDERILGVYEEIGLEDSLELITSIGLG
DNDKIVEIHSREVYTMLNLFKHQKS
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Identical sequences A9S4Z3
3218.JGI74656 XP_001761449.1.60028 jgi|Phypa1_1|74656|fgenesh1_pg.scaffold_48000112

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