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Domain assignment for 3218.JGI75224 from STRING v9.0.5

Domain architecture


Domain assignment details

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No Significant Hits.

Weak hits

Sequence:  3218.JGI75224
Domain Number - Region: 355-457
Classification Level Classification E-value
Superfamily Acid proteases 0.00178
Family Retroviral protease (retropepsin) 0.029
Further Details:      
 
Domain Number - Region: 31-70
Classification Level Classification E-value
Superfamily Retrovirus zinc finger-like domains 0.023
Family Retrovirus zinc finger-like domains 0.0069
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) 3218.JGI75224
Sequence length 825
Comment (Physcomitrella patens)
Sequence
MGMEEIIRGMRDLQIKLARLEENTSINNSKNVSKQGYVQRCIWCDDASHTRKDCNEFNNM
IWQGIICWKDGKIALKDREDLLQTNFGKGGMRALVQDYLKEHETVVRESTSYGARVDDEI
GGSTETSEFWTSAVSTMQEGKLPREALLRTAATIRGRTGWEDPVESLSVHAYIAKSQHEA
LMEEKRRGNFDDTREGNSFKRQTRGDKAREAASQELPIKDTSPSLREKTTETKDKGKLIA
YKLLCDIEAATNLKGVLEERILNAKVEFTLKEVLKITKKEFHDVIIDSIKRKRQLMSETG
MSHAIDARICRDEEEVDIGYKQPTNEKNGYNERVHFEDSSDKEMETLSHYTRKHWAWATT
EVLVKVGDIDELIVALVDHGSEINLMSKDLYKKQKWPIDMEHGWVIRAANNTRGELYGAC
PDVKIRIGDVATEQHFFVQDTTSYPLILGQPYITATRMETKVLDDGSAYARVRSEDGRKA
VQFLTVPPNHERNRDRLWEKPLPKIVEGFKDFGEEVLSRDEGAFDASFIGILENGNIMYK
KVDDFKRKERKRLYDIEGQLCKIGTLQDDERILGVYEENGLKDSLELITSIGLGDNDKII
EIHSRVVYTMLESFQAPEVTVETRYKTADKKVKPVAGPLPEDSKEQMGEASKEASLRDPM
SIGHQFIEETFEELKIGSDGSLLPEEITCFKKMLAKQGRSFAFESHEIGYLEYWEHRPTP
VQILSGQVQSLRYSQPGHTEMLYSILITGVSRKRRTNSHDGFEESIGSNFDNPIRAVLFS
VPFQGTLFTVNGSLKGKNRGESLTARANFGSKLEVGANSGSKTED
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Identical sequences A9S6I3
jgi|Phypa1_1|75224|fgenesh1_pg.scaffold_52000006 XP_001762037.1.60028 3218.JGI75224

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