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Domain assignment for 3218.JGI77190 from STRING v9.0.5

Domain architecture


Domain assignment details

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No Significant Hits.

Weak hits

Sequence:  3218.JGI77190
Domain Number - Region: 229-267
Classification Level Classification E-value
Superfamily Retrovirus zinc finger-like domains 0.0314
Family Retrovirus zinc finger-like domains 0.0069
Further Details:      
 
Domain Number - Region: 562-655
Classification Level Classification E-value
Superfamily Acid proteases 0.045
Family Retroviral protease (retropepsin) 0.057
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) 3218.JGI77190
Sequence length 989
Comment (Physcomitrella patens)
Sequence
MENKNKNFEGSLGGVSRRGSSKGQGMHMDPSIASMFQAFSLSMQQQQSNDRKKALAKALQ
AVVNKIDQFDGRNISRYLRCYVREMELNRVSEKKMVELFGLATIPEIRDHITSITDHCGN
SWEDFSHALKDEYFLEDADCVTKKLFLGWIERPNKNLERRKDRSNIPKTVQARKAPVRTI
PPTMPTVQPSTSLSKKADMGMEEIIGRMRYLQIKLARLEENTSINNSKNVSKQGYVQRCI
WCDDASHTRKDCNEFNNMIRQGIICWKDGKIALKDRDDLLQTNFGKRGMRALVQDYLKEH
ETVARESASYGARIDDEIGGSTKTSEFWASAVSTMQEGKLPREALLRTAATIGGRTGWED
LVESLSVHAYIAKSQHEALMEEKRRENFDDTREGNSSKRQTRGDKAQEAASQELPVKDTS
ASLEEKTKETKGKGKSITYKLLSDIEGTTNLKGMFEEHILNAKVEFTLKEVLGIVKKEFH
DVIINSIKRKRQLMGETGMSHAIDARIYKDEEEVDIGYKQPTNEKNGYNQRVRFEDYSDK
EMETLSHYTRKHWARVTTEILVKVENIEEPIVALVDHGSEINLMCKDLYKKQKWPIDMEH
EWAIRAANNTRGELYGACPDVKIWIGDVPTEQHFFVQDTTSYPLILGQPYITATRMETKV
LDNGFAYTRVRSEDGRKAIQFLTVPPNHERNRDRLREKPLPKIVEGFKDFWESYVSLEKL
PRALAENFVNIPVEILRPLTEREGGIEVFGTPLGNFPVEVSLKRAIGALQIGMNWSPIKA
IIFKARTAESLVIRVRDSRDYFKINFRGTENSMAAGGSAIPIAVQMGTLGDRTTSVAPLP
TFRGLPGADPDQHLSQFLTMQTSQLAEDKGLVQRDSPVHYVEVVNVVLTRDQQKGKNPIQ
DLDDPIEVTTVAPSTRRTEPISVLGRIPILSPQQDEASNSVSHANFSRTSRSIPNEHVPI
SAQPNISSYPLKEPLVVEESTKRKELLPN
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Identical sequences A9SBP4
jgi|Phypa1_1|77190|fgenesh1_pg.scaffold_63000073 3218.JGI77190 XP_001763805.1.60028

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