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Domain assignment for 3218.JGI78026 from STRING v9.0.5

Domain architecture


Domain assignment details

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No Significant Hits.

Weak hits

Sequence:  3218.JGI78026
Domain Number - Region: 304-342
Classification Level Classification E-value
Superfamily Retrovirus zinc finger-like domains 0.0209
Family Retrovirus zinc finger-like domains 0.0069
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) 3218.JGI78026
Sequence length 826
Comment (Physcomitrella patens)
Sequence
MENKNKNLEGFLGGVSGGESSKGQGMHMDPSIASLFQAFSLSMQQQQSNDRKEALATKAL
QAVVNKIDQFDGRNISRYLRCYVREMELNRVSEKKMVALYGLATIPEIRNHITLITDRCG
NSWEDFSHALKDEYFLEDADRVTKKLFLGWIERPNKNLQATELLREFERQYSQLSKVEKL
TLEPNKVDLFLQAADGELQEKLEPLLEDKEEDEGLTTKWKNVEDAVGLLIKKERRKDRSN
IPKTVQAPKAPVRTTPPTMPTVQLSTSLSKKADMDMEEIIRGMRDLQIKLTRLEENTSIN
NSKNVSKQGYVQRCIWCDDASHTRKDCNEFNNMIRQEIICWKDGKIALKAREDLLQTNFG
KGGMRALVQDNLKEHETVVRESASYGARVDDEIGGSTETSEFWASAVSTMQEGKLPREAL
LRTAATIRGRTGWEDPVESLSVHAYIAKSQHEALMEEKRRGNFDDTREGNSFKRQTRGDK
AGEAASQELPVKDTSASLGEKTTETKDKGKSIAYKLLSDIEAATNLKGVLEERILNAKVE
FTLKEVLGIAKKEFHDVIIDSIKQKRQLMSETGMSHAIDARICRDEEEVDIGYKQPTNEK
NGYNQRVRLEDSSDKEMETLSYYTRKHWARTNTEVLVKVGDIEEPIVALVDHANNTRGEL
YGACPDVKIRIGDVATEQHFFVQDTTSYPLILGQPYITATRMETKVLDDGSAYARVRSED
GRKAIQFLTVPPNHERNRDRLREKPLPKIVEGFKDFGERFIPCLNLFKKPVAGPLPEDSK
EKMGETSKEASLRDPMSIGHQFTEETFEELKIGSDGSLLPEEITCF
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Identical sequences A9SDT3
jgi|Phypa1_1|78026|fgenesh1_pg.scaffold_68000159 XP_001764525.1.60028 3218.JGI78026

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