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Domain assignment for 3218.JGI79445 from STRING v9.0.5

Domain architecture


Domain assignment details

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No Significant Hits.

Weak hits

Sequence:  3218.JGI79445
Domain Number - Region: 176-215
Classification Level Classification E-value
Superfamily Retrovirus zinc finger-like domains 0.0178
Family Retrovirus zinc finger-like domains 0.0069
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) 3218.JGI79445
Sequence length 655
Comment (Physcomitrella patens)
Sequence
MQSNYGNIQAVLFSVPFQGTLFSVNGFLKGKNGGESLTARANFGSKLEVEKLTLELNKVD
LFLQAANGELQGKLELFLEDKEEDEGLTTKWKNVEDAVGLLTKKERRKDRSNIPKTVQAP
KAPVRTTPPTMPTVQPSTSLSKKADMGMEEIIRGMRDLQIKLARLEENTSINNSKNVSKQ
GYVQRCIWCDDASHTRKDCNEFNNMIQQGIICWKDGKIALKDREDLLQTNFGKGGMRALV
QDYLKEHETVVRESASYGARVDDEIGGSTETSEFWASAVSTMQEGKLPREALLRTAATIR
GRTDEEEVDIGYKQPTNEKNGYNQRVHFEDSSDKEMKTLSYYTRKHWARATTEVLVKVGD
IEEPIVALVDHGSEINLMSKDLYKKQKWPIDMEHGWAIRAANNTRGELYGACPDRDYGGT
KEEVLSRDEGAFDASFIGILENGNIMYKKVDDFKRKERKRLYDIEGQLRKIATLQDDERI
LGVYEENRLEDSLELITSIGLGNNDKIVEIHSREVYTMLESFQAPEVTVETRYKTTHKKV
KPVAGPLPEDSKEQMGEASKEASLRDPMSIGHQFTEETFEELKIGSDGSLLPEEITCFKK
MLAKQGRSFAFESHEIGCVDPNIITPMVIFTVPHSFGKTEAIAAEVSVVMVNRDF
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Identical sequences A9SHD5
XP_001765747.1.60028 jgi|Phypa1_1|79445|fgenesh1_pg.scaffold_79000043 3218.JGI79445

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