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Domain assignment for 3218.JGI79499 from STRING v9.0.5

Domain architecture


Domain assignment details

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No Significant Hits.

Weak hits

Sequence:  3218.JGI79499
Domain Number - Region: 282-319
Classification Level Classification E-value
Superfamily Retrovirus zinc finger-like domains 0.0288
Family Retrovirus zinc finger-like domains 0.0069
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) 3218.JGI79499
Sequence length 926
Comment (Physcomitrella patens)
Sequence
MWSLRGSILFQAVLFSVPSQGTLFSVNGFLKGKNGGESLTARANFGSKLESFIFQQSKTD
RLLDYRRISILPSTARRPARSRAGKHDFWEKFLVESLLKDKEDFSHALKDEYFLEDADRV
TKKLFLGWIERPNKNLQATELLREFDMQYSQLSKVEKLTLEPNKVDLFLQAADGELQEKL
EPLLEDKEEDEGLTTKWKNVDDAVGLLTKKERRKDRSNIPKTVQAPKAPLRTTPPTMPTV
QPSTSLSKKADMGMEEIIRGMRDLQIKLARLEENTSINNSKNVSKQGYVQRCIWCDDASH
TRKDCNEFNNMMRQEIICWKDGKIALKDREDLLQTNFGKGGMRALVQDYLKEHETVVRES
ASYGTKVDDAIGGSTETSEFWASAISTMQEGKLPREALLRTAATIRGRTGWEDPVESLSI
HAYIAKSQHEALMEEKRRGNFDDTREGNSFKRQTRGDKAREATSQELPVKDTSASLGEKT
TETKDKGKSIAYKLLSDIEAATNLKGVLEEQVLRIAKKEFHDVIIDSIKRKRQLMSEIGM
SHAIDARICRDEEEVDIGYKQPTNEKNGYNQGVRVEDSSDKEIETLSHYTRKHWTRATTE
VLVKVGDIEEPIVALVDHGQPYITATRMETKVLDDGSAYARVRSEDGRKAVQFLTVPPNH
ERNRGRLREKPLPKIVEGFKDFGEEVLSRDEGAFDASFIRILENRNIMYKKVDDFKRKER
KRLYDIEGQLRKLGTLQDDERILGVYEENGLEDSLELITSIGLGDNDKIVEIHSREVYTI
LESFQAPEVTVETRYKTADKNVKLVAGPLPEDSKEQMGEASKEASLRDPMSIGHQFTKET
FEELKIGSDGSLLPKEITCFKKMLAKQGRLFAFESHEIGCVDPNIITPMVIFTVPHVPWN
LRPIPVSRIHLPKLVELLKEKMKIKI
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Identical sequences A9SHI6
jgi|Phypa1_1|79499|fgenesh1_pg.scaffold_79000097 3218.JGI79499 XP_001765851.1.60028

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