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Domain assignment for 3218.JGI80330 from STRING v9.0.5

Domain architecture


Domain assignment details

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No Significant Hits.

Weak hits

Sequence:  3218.JGI80330
Domain Number - Region: 277-315
Classification Level Classification E-value
Superfamily Retrovirus zinc finger-like domains 0.0288
Family Retrovirus zinc finger-like domains 0.0069
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) 3218.JGI80330
Sequence length 856
Comment (Physcomitrella patens)
Sequence
MDPSIASIFQAFSLSMQQQQSNDQKEALVTKALQAVVNKIDQFDGRNISRYLRCYVCKME
LNHVSEKKMVALFGLAKISEIRDHITSIMDRYGNSWEVFSHALKDKYFLKDADCITKKLF
LEWIQWPNKNLQATELLREFERQYSQLSKVEKLTLGPNKVDLFLQAADGELQGKLEFFLE
DKEEDEGLTTKWKNVEDAVGLLTKRERRKDRSNILKTVQAPKAPVCTTPPTMLTVQPSTS
LSKKADMGMEEIIRGMRDLQIKLARLKENTSTNNSKNVSKQGYVQRCIWCDDASHTRKDC
NEFNNMIRQGIICWKVEKIALKDREDLLQINFGKRGMRVLVQDYLIKHETAARESASYGA
RVDDDLGGSTETSEFWACAISTMQEGKLPREALLMTAATIRGRTDWEDPVESLLVHAYIA
KSQHEALMEEKRRGNFDDTREGNSSKRQTRGDKAREAASQELPVKDTSASLGEKTKDKDK
SIAYKLLSDIEAATDLKGVLEERILNAKVEFTLKEVLEIAKKEFHDVIIDSIKRKRIYRD
EEEVDIGYKQPINEKNGYNQQVRFEDYSDKKIKNLNHYTRKHWARATIKVLVKVGDVEEP
IVALVNHDVKIRIGDVATEQHFFVQDTTSYPLILGQPYITTTGMETKVLDDGSAYAKIRS
EDERKSVQFLTVPPNHERNRDRLREKHLSKIVEGFKDFGEEVLSRDQGAFDASFIGILEN
GNIMYKKVDDFRRKERKRLYDIEGQLCKLDTLLGDNDEIVEIHSREVYTILESFQAPEVT
VETRYKTADKKVKSVARPLPEDSKEQMRKASKEASLRDSMSIRHQFTKETFEELKIGSDS
SLLPEEITCFKKMLAK
Download sequence
Identical sequences A9SJN7
jgi|Phypa1_1|80330|fgenesh1_pg.scaffold_85000069 XP_001766589.1.60028 3218.JGI80330

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