SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain assignment for 3218.JGI80752 from STRING v9.0.5

Domain architecture


Domain assignment details

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No Significant Hits.

Weak hits

Sequence:  3218.JGI80752
Domain Number - Region: 46-75
Classification Level Classification E-value
Superfamily Retrovirus zinc finger-like domains 0.0191
Family Retrovirus zinc finger-like domains 0.0069
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) 3218.JGI80752
Sequence length 460
Comment (Physcomitrella patens)
Sequence
MPTVQPSTSLSKKADMGMEEIIRGMRDLQIKLARLEENTSINNLKNVSKQGYVQRCIWCD
DASHTRKDCNEFNNMIWQGIICWIDGKIALKDREDLLQTNFGKGGMRALVQDYLKEHETV
VRESASYGARVDDEIGGSTETTTIRGATGWEDPVESLSVHAYIAKSQHKALMEEKRRGNF
DDTREGNSFKRQTRGDKAREAASQELPVKDTSASLGEKTTETKDKGKSIAYKLLFDIEAA
TNLKGVLEERILNAKRKRQLMGETGMSHAIDARICRDEEEVDIGYKQPTNEKNGYNQRVR
FKDSSDKEMEILSHYTRKHWTRATTEVLVKQDYGGTKEEVLLRDEGAFDASFIGILENGN
IMYKKVNDFKRKERKRLYNIEGELRKLGTLQNDERILGVYEENGLEDSLELITSIGLGDN
DKIVEIHSREIYTILESFQAPEVTVETRYKTANKKVKPVA
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Identical sequences A9SKZ7
jgi|Phypa1_1|80752|fgenesh1_pg.scaffold_89000021 3218.JGI80752 XP_001767020.1.60028

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