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Domain assignment for 3218.JGI81352 from STRING v9.0.5

Domain architecture


Domain assignment details

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No Significant Hits.

Weak hits

Sequence:  3218.JGI81352
Domain Number - Region: 327-365
Classification Level Classification E-value
Superfamily Retrovirus zinc finger-like domains 0.034
Family Retrovirus zinc finger-like domains 0.0069
Further Details:      
 
Domain Number - Region: 501-609
Classification Level Classification E-value
Superfamily YwmB-like 0.0392
Family YwmB-like 0.036
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) 3218.JGI81352
Sequence length 1059
Comment (Physcomitrella patens)
Sequence
MWSRLRGSILFRVVLFSVPFQGTLFMVNGSLKGFLGEVSGGESSKGQGMHMDPSIASLFQ
AFSLSMQQQQSNDRKEALATKALQAVVNKIDQFDGRNISRYLRCYVREMELNQVSEKKMV
ALFGLATIPEIRDHITSITDRCGNTWEDFSHALKDEYFWEDADRVTKKLFLGWIEWPNKN
LQATELLREFERQYSQLSKVEKLTLEPNKVDLFLQAADGELQEKLDPLLEDKEEDEGLTT
KWKNVEDAVGLLTKKERRKDMSNIPKTVQAPKAPVRTTPPTMPTVQPSTSLSKKADMGME
EIIRGMRDLQIKLARLEENTSINNSKNVSKQGYVQRCIWCDDASHTRKDCNEFNNMIRQG
IICWKDGKIALKDREDLLQMRALVQDYLKEHETVVRESASYGARVDDEIGGSTETSEFWA
SAVSTMQEGKLPREALLRTAATIRGRTGWEDPVESLSVHAYIAKSQHEALMEEKRRGNFD
DTREGNSFKRQIRGDKAREAASQELPVKDTSASLEKKTTETKDKGKSIAYKLLSDIEAAT
NLKGVLEERILNAKVEFTLKEVLGITKKEFHDVIIDSIKRKRQLMSETGMSHTIDARICR
DKEEVDIGYKQPTNEKNGYNQRIRFEDSSDKEMETLSHYTRKHWARATTEVLVKVGDIEE
PIVAFEDHGSEINLMSKDLYKKQKYPIDMEHGWAIRAANNTRGELYGACPDVKIRIGDVA
TEQYFFVQDTTSYPLILGQPYITATRMETKILDDGSEDGRKAVQFLTVPPNYERNRDRLR
EKPLPKIVEGFKDFGELRKIRTLQDDERILGVYEENGLEDSLELITSIGLGDNDKIVEIH
SREVYTMLESFQAPEVTVERRYKTADKKVKPVAGPLPEDSKEQMGEASKEASLRDPMSIG
HQFTEETFEELKIGSNGSLLPEEITCFKKMLAKQGRSFAFESHEIGCVDPNIITPMVIFT
VPHAVLFSVPSQGTLFSVNGFLKGKNGGESLAARANFESKLRSRELERGASCFGSGKERH
RIWIFLLRRVLGKTEAIAAEIYSCQSVKEKNSMKNNPDK
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Identical sequences A9SMD2
jgi|Phypa1_1|81352|fgenesh1_pg.scaffold_94000049 3218.JGI81352 XP_001767497.1.60028

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