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Domain assignment for 3218.JGI86852 from STRING v9.0.5

Domain architecture


Domain assignment details

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No Significant Hits.

Weak hits

Sequence:  3218.JGI86852
Domain Number - Region: 470-510
Classification Level Classification E-value
Superfamily Retrovirus zinc finger-like domains 0.023
Family Retrovirus zinc finger-like domains 0.0062
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) 3218.JGI86852
Sequence length 1148
Comment (Physcomitrella patens)
Sequence
MEFSRTRNLMASGGPAVLIVVQMGAGIVDAVPLQVVPPSSSQPYASYFAYQKPIPTKELP
NALVSRDPNESLLLTLTKKIDELAVNLANDKEKSYLEYWEQRPTPVQILSGQIQSPCYSQ
PGHIEMLCSIPITGVSRKRKDQFTRRAALFSVPFQGTLFSVNGSLKGKNGGESFDGFWGG
VSGEDSSKGQGMHMDPSIASMFQAFSLSMLQEQSNDRKEALATKALQTVVNKIDEFDGRN
ISRYLRCYVREMELNPVSEKKMVELFGLATIPEIRDHITSIMDRYGNSWEVFSHALKDEY
FLEDADRVTKKLFQEWIERPNKNLQAKELLREFERQYPQLSKVEKLTLEPNKVDLFLQAA
DGELQGKLELLLEDKEEDEGLTTKWKNVEDAMGLLTKSRRTKDRSNIPKSIQAPKAPGRT
TPQTMPTIQPSTSLSKKANMGMEEIIRRMRDLQIKLTRLEENTSTNNSKNVSKQGYVQRC
IWCDDASHTKKDCNEFNNMIWQGIICWKDGKIALKDREDLLQTNFGKGGMRALVQDYLKE
HETAARESASYGARVDDDLSGSTKTSEFWASAISTMQEGKLPREALLKTAATIRGATGNS
SKRQTRGDKAREAASQELPVNDTLASLEEKTRETKDKGKSITYKLLSDIEAATNLQGVLE
ERILNAKIEFTLKEVLGIAKKEFHDVIIDNIKRKRQLVGKTRMSHAINARIYKDEEEVDI
GYKQPTNEKNGYNQRVHFEDYSDKEMETLSHYTRKNWARATTEVFVKVEDIEEPIVALVD
HGSEINLMSKDLYKKQKWPIHMEHGWAIRAANNAWSKLYGASTRMETKALDDGFAYARVR
SKDGRKAVQFLTVPPTHEWNRDRLREKPLPKNVEGFKDFGERILGVYEENGLEDSLELIT
SIGLGDNDKIVEIHSREVYTILESFQAPEVAVETRYKMVDKKVKPVAGPLPEDCKEQMGK
ASKEESLRDPMSIGHQFTKETFEELKIGSDGSLLSEEITCFKKMLAKQGRSFAFESHEIG
CVDPNIITPMVIFIVPHVPWNLRPIPVPRSNYGKIQVLLRASTNLTRRTNLIQLRKHLGL
TTELLANMRPELIGRLNVVLIKGLRFRFRLFHPLWRFGNVLSVKRSLKGKNGGVSSDDGA
NSGSKTED
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Identical sequences A9T1K7
3218.JGI86852 jgi|Phypa1_1|86852|fgenesh1_pg.scaffold_151000001 XP_001772492.1.60028

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