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Domain assignment for 3218.JGI87434 from STRING v9.0.5

Domain architecture


Domain assignment details

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No Significant Hits.

Weak hits

Sequence:  3218.JGI87434
Domain Number - Region: 277-315
Classification Level Classification E-value
Superfamily Retrovirus zinc finger-like domains 0.0288
Family Retrovirus zinc finger-like domains 0.0069
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) 3218.JGI87434
Sequence length 924
Comment (Physcomitrella patens)
Sequence
MDPSIASLFQAFSLSMQQQQSNDRKEALATKALQAVVNKIDQFDGRNISRYLRCYVREME
LNRVSEKKMVALFGLATIPEIRDHITSITDRCGNSWEDFSHALKDEYFLEDAERVTKKLF
LGWIERPNKNLQATELLREFERQYSQLSKVEKLTLELNKVDLFLQAADGELQDKLKPLLE
DKEEDEGLTTKWKNVEDAVGLLTKKERRKDRSNIPKTVQAPKAPIRTTPLTMPAVQPSTS
LSKKVDMGMEEIIRGIRDLQIKLARLEENTSINNSKNVSKQGYVQRCIWCDDASHTRKDC
NEFNNMIRQGIICWKDGKIALKDREDLLQTNFGKGGMRALVQDYLKEHETIAGESANYGT
RVDDAIGGSTETSEFWASAVSTMQEEKLPREVLLRTAAIIRGRIGCEDPVESLSVHAYIA
KSQHEALMEEKRRGNFDDTREGNSFKRQTRGEKAREAASKELSVKNTSSSLREKTTDTKD
KGKSIAYKLLSDIEAATNLKGVLEERILNAKVEFTLKEVLGIAKKEFHDVIIDSIKRKKQ
LMSETGMSHANDARICRDEEEVDIGYKQPTNEKNGYNQRVHFEDSSDREMKTLSHYTRKH
WARATTEVLVKVEDIEEPLVALVDHGSEINLMSKDLYKKQKWPIDMEHGWAIGDVATEQH
FFVQDTTSYPLILGQSYITATRMETKVLDDGSAYARRDYGGTKEEVLSRDEGAFDASFIG
ILENGNIMYKKVDDFKKKERKRLYDIEGQLCKIGTLQDDERILDVYEENGLEDSLELITS
IGLGDNDKIVDIHSREVYTMLEAPEVTVEKRYKTADKKDSKEQMGEASKEASLRDSMSIG
HQFTEETFEELKIGSDGSLLPEEITCFKKMLAKQGRSFAFESHEIGCVDSNIITPMVIFT
VPHVPWNLRPIQYRGHIYLNWWNY
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Identical sequences A9T327
XP_001772969.1.60028 jgi|Phypa1_1|87434|fgenesh1_pg.scaffold_157000071 3218.JGI87434

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