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Domain assignment for 3218.JGI87436 from STRING v9.0.5

Domain architecture


Domain assignment details

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No Significant Hits.

Weak hits

Sequence:  3218.JGI87436
Domain Number - Region: 508-547
Classification Level Classification E-value
Superfamily Retrovirus zinc finger-like domains 0.0209
Family Retrovirus zinc finger-like domains 0.0066
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) 3218.JGI87436
Sequence length 1025
Comment (Physcomitrella patens)
Sequence
MDPSIASMFQAFSLSMQQLQSNDRKEALATKALQAVVNKIDQFDGRNISREVYTMLESFQ
APEVTVETRYKMVDKKVKPVAGPLPEDSKEQMGEASKEASLRDPMSIGHQFTEETFEELK
ISFDGSILSKEITCFKKMLAKQGRSFAFESHEIGCVDPNIITPMVIFTVPHRPTGWDKKD
FDKQSKSICIDLRYIIVVVYIPAVKTNRLLDYRRISILPSTARRPTRSRAGKHDFWKKFL
VGSLLKDKQLQSNDRKEALATKALQAVVNKIDQFDGRNISRYLRCYVREMELNRVSEKKM
VAIFGLATIPEIRDHITSITDRYGNSWEDFLHALKDKYFLEDADRITKKLFLGWIEWPNK
NFQATELLREFERQYSQLSKVEKLTLEPNKVDLFFQAAYGELQEKLEPLLEDKEEDEGLT
TKWKNVEDAVELLTKKERRKDKSNIPKTVQAPKAPIRTTPPTMPTVQPSTSLSKKADMGM
EEIIRGMRDLQIKLARLEENTSINNLKNVSKQGYVQRCIWCNDASHTRKDCNEFNNMIRQ
GIICWKDGKIALKDREDLLQTNFGKGGMRALVQDYLKEHETVVRESASYGARVDDEIGGR
KLPREALLRTQATIRGRTGWEDLVESLSVHAYIAKSQHEALMEEKRRGNFDDTREGNSFK
RQTRGEKAREAASQELSVKNTSSSLREKTTDTKDKGKSIAYKLLSDIEAATNLKGVLEER
ILNAKVEFTLKEVLGIAKKEFHDVIIDNIKRKRDEEEVDIGYKQPTNEKNGYNQRVHFED
SSDKEMETLSHYTRKHWTRATTEVLVKPIDMEHGWAIRAANNTRGELYGACVDVKIRIRD
VATEQHFFVQDTTSYPLILGQPYITATRMETKRDYGGTKEEVLSRDEGAFDASFIGILEN
GNIMYKKVNDFKRKERKRLYNSEGLLRKIGALQDDERILGVYEENGLEDSLELITSIGLG
DNDKIVEIHSREVYTMLESFQAPEVTVETRYKMVDKKQEDESDLDNEGNEDELDKDVEDI
FRIKQ
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Identical sequences A9T329
jgi|Phypa1_1|87436|fgenesh1_pg.scaffold_157000073 3218.JGI87436 XP_001772971.1.60028

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