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Domain assignment for 3218.JGI88515 from STRING v9.0.5

Domain architecture


Domain assignment details

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No Significant Hits.

Weak hits

Sequence:  3218.JGI88515
Domain Number - Region: 46-84
Classification Level Classification E-value
Superfamily Retrovirus zinc finger-like domains 0.0288
Family Retrovirus zinc finger-like domains 0.0069
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) 3218.JGI88515
Sequence length 903
Comment (Physcomitrella patens)
Sequence
MPTVQPSTSLSKKADMGMEEIIRGMRDLQIKLARLEENTSINNSKNVSKQGYVQRCIWCD
DASHTRKDCNEFNNMIRQRIICWKDGKIALKDREDLLQTNFGKGGMRALVQDYLKEHETV
VRESASYGARVDDEIGGSTETTEFWASAVSTMQEGKLPREALLRTATIIRGRTGDKAREA
ASQELPVKDTSASLGEITTETKDKGKSIAYKLLSDIEAATNLKGVLEERILNAKVEFTLK
EVLGIAKKEFHDVIIDSIKRKRQLMSETGMSHAIDARICRAEEEVDIGYKQPTNEKNGYN
QRVRFEDSSDKEMETLTHYTRKHWARATTEVLVKVKPVAGPLPEDSKEQMGEASKEASLR
DPMSIGHQFTEETFEELKIGSDGFLLPEEITCFKKMLAKQAPEVTVETRYKTADKKVKPV
AGPLPEDSKEQMGEASKEASLRDPMSIGHQFTEETFEELKIGSEGFLLPEEITCFKKMLA
KQGRSFAFESHEIGCVDPNIITPMVIFTVPHRIICWKDGKIALKDREDLLQTNFGKGGMR
ALVQDYLKEHETVVRESASYGARVDDEIGGSTETTEFWASAVSTMQEEKLPREALLRTAA
TIRGRTGWEDPVESLSVHAYIAKSQHEALMEEKRRGNFDDTREENSFKRQTRGDKAREAA
SQELPVKDTSASLGEKTTETKDKGKSIAYELLSDIEAATNLKGVLEERILNAKHRPTPVQ
ILSGQVQSPRYSLPGHTEMLHSILITGVSRMRRTNSHDGFEEPIGSNFENPIQGTLFTVN
GSLKGKNGGEGFDDSFGKTEAIAAEVSVVMDNQWIQDRKYKGVLKINSLGCSGFSVTSRD
LSAGGKKKRLRQAVEEHPYRFTVHCCSRLYSSSQKLIDCLTIGESPYYLLQPDARCVLEQ
EST
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Identical sequences A9T5Y8
jgi|Phypa1_1|88515|fgenesh1_pg.scaffold_170000061 XP_001774027.1.60028 3218.JGI88515

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