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Domain assignment for 3218.JGI89044 from STRING v9.0.5

Domain architecture


Domain assignment details

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No Significant Hits.

Weak hits

Sequence:  3218.JGI89044
Domain Number - Region: 388-426
Classification Level Classification E-value
Superfamily Retrovirus zinc finger-like domains 0.0256
Family Retrovirus zinc finger-like domains 0.0069
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) 3218.JGI89044
Sequence length 855
Comment (Physcomitrella patens)
Sequence
MQSNYGKIQVLLQASANLMQRTNLIQFREHPGLTTGLLANMRPELVGRLNVVPITGYLEY
WEHRPTPVQILSGQVQSLRYSQPGHTEMLRLIPITGVSRKRRTNSHDGFKEPIGSNFDNP
IRAVLFSVPFQGTLFSVNGFLKGKNGGESLTARANFGSKLEQSKTDRLLDYRRIFILPST
ARRPARSRAGKHDFWEKFLVGSLLKDKEDFSHALKDEYFLKDADRITKKLFLGWIERPNK
NLQATELLREFERQYSQLSKVEKLTLEPNKVDLFLQAADGELQEKLEPLLEDKEEDEGLT
TKWKNVEDAVGLLTKKERRKDRSNIPKTVQAPKAPVRTTPPTMPTVQPSTSLSKKADMGM
EEIIRGMRDLQIKLARLEENTSINNSKNVSKQGYVQRCIWCDDASHTRKDCNEFNNMIRQ
GIICWKDGKIALKDREDLLQTNFGKGGMRALVQDYLKEHETVVREKASYGARVDDEIGGS
TETSEFWASAVSTMQEGKLPREALLRTAAIIRGRTGWKDPVESLSVHVYIAKSQHEALME
EKRRGNFDDTREGNSFKMQTRGDKAREAASQELPVKDTSASLGEKTMETKDKGKSIAYKL
LSDIEATTNLKGMLEERFWGGTTVKRDYGGTKEEVLSRDEGAFDASFIGILENRNIMYKK
IDDFKRKERKRLYDFEGQLRKIGTLQDDERILGVYEENGLEDSLELITSIGLGDNDKIVE
IHSREVYTMLESFQAPEVTVETRYKTADKKVKPIAGPLPEDSKEQMGETSKEASLRDPMS
IGHQFTEETFEELKIGSDGSLLPEEITCFKKMLAKQEMNMEDLNEGIEIPQQEDESDMDN
EGDEDELDKDVGDIF
Download sequence
Identical sequences A9T7C0
XP_001774481.1.60028 3218.JGI89044 jgi|Phypa1_1|89044|fgenesh1_pg.scaffold_177000063

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