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Domain assignment for 3218.JGI90196 from STRING v9.0.5

Domain architecture


Domain assignment details

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No Significant Hits.

Weak hits

Sequence:  3218.JGI90196
Domain Number - Region: 225-264
Classification Level Classification E-value
Superfamily Retrovirus zinc finger-like domains 0.0141
Family Retrovirus zinc finger-like domains 0.0069
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) 3218.JGI90196
Sequence length 693
Comment (Physcomitrella patens)
Sequence
MENENKNFEGFLGGVSGEDSSKGQGRHMDPSIASMFQAFSLSMQQQQSNDRKEALATKAL
QAVVNKIDQFDGRNISRYLRCYVREMELNQVSEKKMVELFGLATIPEIRDYITSIMDRYG
NFWEVFSHALKDEYFLEDADRVTKKLFLEWIEQPNKNLQLTELLREFERQYSQLSKKRGR
IGAQPSTSLSKKADIGMEEIIREMRDLQIKLARLEENTSTNNLKNVSKQRYVQRCIWCDD
ASHTRKDCNEFNNMIRQGIICWKDGKIALKDREDLLQTNFGKGGMRALVQNYLKEHETAA
RESASYGARVDDDLSGSTETSWEDSVESLSVHAYIAKSQHEALMEEKRRGNFDDTRKGNS
SKRQTRGDKAWEAASQELLVKDTSASLGEKTKETKDKGKSIAYKLLSDIEVATNLKGVLE
ERILNAKVEFTLKEVLGIAKKEFHDVIIDSIKRKRKLMGETGMNHAIDARICRDEEEVDI
SYKQPTTEKNGYNQRVCFEDSSDKEMETLSHYTRKHWARATTEKQKWPIDMEHGWAIRAA
NNTWGELYGACPDVKIRIGDVASEQHFFVQDTTSYPLILGQPYITATRMEKKVLDDGSAF
ARVRSKDERKAVQFLTVPPNHERNRDRLREKPLPKIVEGFKDFGKGIMIRLLRFKTADKK
VKPIAGPLPEDSKEQMGEASKEARNHLLQKDVG
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Identical sequences A9TAE7
jgi|Phypa1_1|90196|fgenesh1_pg.scaffold_194000031 XP_001775592.1.60028 3218.JGI90196

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