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Domain assignment for 3218.JGI90827 from STRING v9.0.5

Domain architecture


Domain assignment details

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No Significant Hits.

Weak hits

Sequence:  3218.JGI90827
Domain Number - Region: 567-655
Classification Level Classification E-value
Superfamily Acid proteases 0.0267
Family Retroviral protease (retropepsin) 0.051
Further Details:      
 
Domain Number - Region: 277-315
Classification Level Classification E-value
Superfamily Retrovirus zinc finger-like domains 0.0419
Family Retrovirus zinc finger-like domains 0.0069
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) 3218.JGI90827
Sequence length 939
Comment (Physcomitrella patens)
Sequence
MDPSIASMFQAFSLSMQQQQSNDRKEALATKALQAVVNKIGQFDGRNISRYLRCYVREMK
LNRVSEKKMKELFGLATIPEIRDHITLITDRYENSWGVFSHALKNEYFLEDADRVTKKLF
LGWIERLNKNLQATELLREFERQYSQLSKVEKLTLESNKVDLFLQAADGELQEKLELLLE
DKEEVEGLTMKWKNVEDAVGLLTKKEKRKDRSNIPKTVQAPKAPVHTTPPTIPRVQPSTS
LSKKAEMEMEEIIRGMRDLQIKLARLEENTSINNSKNVSKQGYVQRCIWCDDASHTRKDC
NEFNNLIRHGIICWKDGKIALKDREDLLQTNFGKRGMKALVQDYLKEHETAARESASYGA
RVDDEISGSTETTTIRGKTGWEDPVESLSVHAYIAKSQHKALMEEKRRGNFNDIRKENSS
KRQTRGDKAREAASQELPIKDNSASLGEKTKETKDKSKSIAYKLLSDIEAATNLKGVLEE
RILYAKVEFTLKEDLGIAKKEFHDVIIDSIKIYKDEEEVDIGYKQPSNEKNGYNQRVRFE
DSSDKKMETLSHYTRKHWARATTEILVKVGDIEEPIVALIDHGSEINLMSKDLYKKQKWP
IDMEHGWAIRAANNTWGELYGACPDVKIRIGDVATEQHFFVQDTMSYPLILGQPYIMATR
METKILDDGSAYARRDYGGTKEEVLSRDEGAFDANFIGILENGNIMYKKVDDFKRKERKR
LYDIEGQLHKLGTLQDDERILGVYEENGLEDSLELITSIGLGDNDKIIEIHSREVYTILE
SFQAPEVTVETRYKMTDKKIKPVVGPLPKDSKEQMGEASKEASLRVPMSIGHQFTKETFE
ELKIGSDGSLLPEEITCFKKMLAKQGSVTPLQSAGDTEMLHSIPITGFSRKGKDQFTRRG
TLFSVNGSLKGKNGGGSSDDGSQFRILALTVGANFGSKL
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Identical sequences A9TC43
XP_001776178.1.60028 3218.JGI90827 jgi|Phypa1_1|90827|fgenesh1_pg.scaffold_202000005

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