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Domain assignment for 3218.JGI90911 from STRING v9.0.5

Domain architecture


Domain assignment details

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No Significant Hits.

Weak hits

Sequence:  3218.JGI90911
Domain Number - Region: 221-248
Classification Level Classification E-value
Superfamily Retrovirus zinc finger-like domains 0.0549
Family Retrovirus zinc finger-like domains 0.0069
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) 3218.JGI90911
Sequence length 785
Comment (Physcomitrella patens)
Sequence
MELNRVSEKKMVALFGLATIPEIRDHITSIADRCGNSWEDFSHALKDEYFLKDADRVTKK
LFLGWIERPNKNLQATELLREFERQYSQLSKVEKLTLEPNKVHLFLQAADGELQEKLEPL
LEDKEEDEGLITKWKNVEDAVGLLTKKERRKDRSNILKTVQAPKAPVRTTPPTMPTVQSS
TSLSKKADMGIEEIIRGIRDLQIKLARLEEITSINNSKNVSKEGYVQRCIWCDDASHTRK
DCNEFNNMIRQGIICWKDEKIALKDREDLLQTNFGKGGMRALVQDYLKEHKTVARESASY
GARVDDEIGGSTETTTIRGRTGWEDPVESLSVHAYIAKSQQEAFMEEKRRRNFDDTREGN
SFKRQTRGDKAREAASQELPVKDTSVSLGKKTTETKDKGKSIAYKLLSDIEAATNLKGVL
EERILNTKVEFTLKEVLGIAKKEFHDVIIDSIKRKRDEEKVDIGYKQLTNEKNGYNQRAT
IEVLVKVGDIEEPIVALVDHGSEINLMSKDLYKKQKWSIDMEHGWAIRAANNTQGELYGA
CPDVKIRIGDVATQPYSTATRMETKVLDDGSAYARIRSEDERKAVQFLTVPPNHERNRDR
LREKPLPKIVEGFKDFGEEVLSRDQGAFDASFIDILENGNIMYKKVEDFKRKERKRLYNI
EGQLRKIGTLQDNDRILDVYEENGLEDSLELITSIGLGDNDKIVEIHSREAVLFSVPFQG
TLFSVNGFLKGKNGGESLTARANFSSKLESFIFQQSKLIDCLTIGESPYYLLQPDARRVL
EQEST
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Identical sequences A9TCC0
XP_001776284.1.60028 jgi|Phypa1_1|90911|fgenesh1_pg.scaffold_203000012 3218.JGI90911

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