SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for 350688.Clos_1375 from STRING v9.0.5

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  350688.Clos_1375
Domain Number 1 Region: 109-321
Classification Level Classification E-value
Superfamily MurD-like peptide ligases, catalytic domain 1.16e-52
Family MurCDEF 0.00024
Further Details:      
 
Domain Number 2 Region: 323-460
Classification Level Classification E-value
Superfamily MurD-like peptide ligases, peptide-binding domain 6.28e-36
Family MurCDEF C-terminal domain 0.0011
Further Details:      
 
Domain Number 3 Region: 1-105
Classification Level Classification E-value
Superfamily MurE/MurF N-terminal domain 2.09e-22
Family MurE/MurF N-terminal domain 0.0011
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) 350688.Clos_1375
Sequence length 464
Comment (Alkaliphilus oremlandii OhILAs)
Sequence
MMKQNIQAIARACNGTIIKKGSVDTIGSVSTDTRTIQKGSLFVPLIGEKFDGHTFIEEAI
KNGAQAVFVQEGHNTKTIQAFNDVWLIEVKDTLKALQAISVYYRKLFPIPFIGVTGSVGK
TSTKDLISGVLSGKFNVHKNLGNFNNEIGLPLTLFNLEENHQISVLEMGMSSFGEIRDLV
DMVHPEIGVITNIGVSHIEHLGSKEGILKAKMEIASNFKEGNYLLVNGDDEYLRCIHKDD
KDYTVIFYGLSSTNDFYPMSVEDLGEEGSAFTVEINGEAVPFKIRQLGIHNVYNALAAVW
IGLKYHMTFEEIQRGLDGFQPSKMRLEVITKGRMKIINDAYNASPDSMKAALDVLDHMKS
NRKIAVLGNMFEMGSFSEEGHRSVGAYFAKKNIDILVTVGEMANWIGLEAKKYGIEENSI
RHVFNNKEAIEMLGQFVQEEDAILVKGSRGMAMEEIVNFLQERS
Download sequence
Identical sequences A8MH32
WP_012159231.1.49300 gi|158320408|ref|YP_001512915.1| 350688.Clos_1375

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]