SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for 35128.JGI24233 from STRING v9.0.5

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  35128.JGI24233
Domain Number 1 Region: 65-222
Classification Level Classification E-value
Superfamily Quinoprotein alcohol dehydrogenase-like 0.0000183
Family Quinoprotein alcohol dehydrogenase-like 0.023
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) 35128.JGI24233
Sequence length 1226
Comment (Thalassiosira pseudonana CCMP 1335)
Sequence
MRPFIPLSTPLLLAALTNALHADEAGINDFVVRSAGHGESNEAASSPTDAAVGGAGGSER
RGGALIGGMNYRPDPACWISARNATDDGRVLWRVNACSSSSSATESSSRNTFDNSQFVPR
HATLASTANNMVYSLDDEGVFRGWNGVNGGLVFDIDVPSTLSQGGGEEYTVAGVPRLLSA
TSDDVLVVGTVFSGREGDEALVLHDAITGQLLVDNSSTSTATASKSITAKSLLSKAKLSS
RKSESAQIIDMISLSSSSVAVLVGYSGRQPVASVKGTTVDRNVGSFASMAWVEVKLSFVE
GSSANGHDGEEGDGPAKELVYEVVSAASLRVDAVSSTPIMLSSIKIVSSSSPEKVVMLAI
AASTTQLIIADVDVASGKGGGQSVEIDILHPYWRMISTIHVDDRGGSTQHVVRVAGVDDR
YPAPRRIESLFLLSDESVVKGEEVAFQRVYGGGKSDEEVQYDALAYCPSMGVVVTAAAGE
GGEEQTVASSFQISHEGVKSGRVAWSSLLLEGDATVVASSRGGDSGGLVQSAHLVECTAD
SMVVVFVARGGMNVALEVKADSGNVTARQLWSSEEALGSISSAVFLDETHSIESLDDGAA
DASVDDEEEMALRNLRFSNRIHSQVSSFKNFIFGGGALSSLASIALLSDEKKAERDFAFG
FAKIAVLLSESMHRIIALDTAKKGRIVWSMNLHPQALWHKIVHGGQFVALSDSHGYGGVH
DHEMLALSFVSSGQASLMEWKCFDGTTGKLFSGDTVSMSSDVTQVVPLRSSTHHAHESKS
CRQVALVVKSDLTISVVPDTPRSYSIVDETVSAVGRNGLFLHTVDEQTGELRALRVTRKA
GSENSQGSDLFELVTVGTTIFDPSQETIVNVAYPQRGEAIQSPSTVLGDDALLLKYLNPH
LVVVVTEATKSFLTDISPVADGSDETANGFYNALIGSEGASSQKRKPLGAAKPGEAPAPT
ASVNTATPSLFISLIDSVSGQILHRASHAHAVASDVVDAAATMVPVVISENWVVYTYFNQ
RTRRTDVGVLTLHEGMIDKNGITAFSAPEQELTFSSLESAKPIVLSKTYGLAKPVTALGV
TTTKAGISSKQFMFATKNDQVVSMDRRMLDPRRPNGELKESEKMEGLMRYSPILPIIPLR
TPSHVYEVSSVQSIASTSANVESQSLMLAYGGPDVFFFRLAPSKGFDLLPDDFNRGLLSV
VLVGLLVLLISIQTMNKKKMATTVWS
Download sequence
Identical sequences B8C9T9
XP_002292906.1.2071 jgi|Thaps3|24233|estExt_fgenesh1_pg.C_chr_100317 35128.JGI24233

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]