SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for 355278.LBF_2340 from STRING v9.0.5

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  355278.LBF_2340
Domain Number 1 Region: 249-516
Classification Level Classification E-value
Superfamily Cryptochrome/photolyase FAD-binding domain 1.31e-46
Family Cryptochrome/photolyase FAD-binding domain 0.0018
Further Details:      
 
Domain Number 2 Region: 46-216
Classification Level Classification E-value
Superfamily Cryptochrome/photolyase, N-terminal domain 0.000000000000278
Family Cryptochrome/photolyase, N-terminal domain 0.027
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) 355278.LBF_2340
Sequence length 523
Comment (Leptospira biflexa serovar Patoc Patoc 1 Ames )
Sequence
MSKHFAPSFTRHEKIPRQGNLSPPLIGVKSDRIRVCNEKPIQLEKSYVLYWMQAYRRFDA
NHAFNHAVNLAKELNKELIVYEGLRMDYPWNSERIHQFILEGMIENQTRADELEIKYWPF
VETPKNLGKGLLKEISENASVVVTDDFPCFIIPEQTEKLAKKIHCQLLAIDGNSLIPFSR
FAKQASAARILRLWIHKELNREFPKMNTIIWKNEDLSKLNGKTNPPERIGLPKSIDGILK
LIPFQNIVSPVKGVKGGRNEALRLLNDFLKHKLDLYLTKRSEPNRPELTATSGLSPYLHF
GWIGLDEIFVAVLKHSAKGKWNPERMSHEKPGDREHFYSPSVSANHFLDELITWRDIGYL
FFWKDKPKQINLSHLPDWVKTNFQKHQNDHREYVYTLEQFESAKTHDELWNAAQTELVKT
GKIHNYMRMLWGKKVIEWSKTYEEAFFILEHLNNKYAYDGRNPNSYTGILWCFGLFDRPW
FPERNVFGNVRFMSSDSTKKKFKLNSYLEYIGELSGKSNSLFP
Download sequence
Identical sequences gi|189911853|ref|YP_001963408.1| 355278.LBF_2340

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]