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Domain assignment for 3694.gw1.XVII.686.1 from STRING v9.0.5

Domain architecture


Domain assignment details

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Strong hits

Sequence:  3694.gw1.XVII.686.1
Domain Number 1 Region: 474-558
Classification Level Classification E-value
Superfamily RNA-binding domain, RBD 3.39e-16
Family Canonical RBD 0.0099
Further Details:      
 
Domain Number 2 Region: 771-856
Classification Level Classification E-value
Superfamily RNA-binding domain, RBD 0.000000557
Family Canonical RBD 0.014
Further Details:      
 
Weak hits

Sequence:  3694.gw1.XVII.686.1
Domain Number - Region: 212-240
Classification Level Classification E-value
Superfamily CCCH zinc finger 0.00034
Family CCCH zinc finger 0.0042
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) 3694.gw1.XVII.686.1
Sequence length 866
Comment (Populus trichocarpa)
Sequence
MELKVSTLKTGGLSPADCISDPEEKEVSDEDDDDRNHKHRRREIRSQSLERDSLEPVFTR
PYRKRNKPFENGQFYQENDYNSVPLEKGFATKFERIRPGLVSLPRMPVDWNQRIRSNQTF
YGDPGLGRGRGREPVSWSQHDSRFSPVDIASQMVHQGQSLFTGRGLANVSNAQSASWNAY
GLFPGIPNGGLDKLRPIGLQATLRPAVTSSLNMGIPQQRCRDFEERGFCLRGDMCPMEHG
VNRIVVEDVQSLSQFNLPVSLPRAQLVGTTARPGALPTVGAPSATLINSKGMHSKCNKPG
IVNAGLGFNGAHTGSASVSGGDLYDPDQPLWNDSVPETSSALIAPHSPKIDEIESMISID
SFDHNHVSLRGGADNECPIRSTGIAVHSESLNSSVWGKVRASNNRLHVKEKTDLTVSMLN
NMESESKENQGALANVRGTSRQGKQINFEDSSAKTIDSPAKTQSNTMRHTPKPSQKALRT
LFVNGIPQKSNKREALLSHFQKFGEVIDIYIPLNTERAFVQFSKREEAEAALRAPDAVMG
NRFIRLWWANRDSIPDGGAGSSNSVSVTPRGVTSTSFPPHLPIGNSGKDNLQLSVSKATA
VPPSVAPVPAIDHSKVITTNVPKVPPPMQKLESLEQLKEELRKKQELLDQKRNDFRRQLD
KLEKQATGVKGEVTAEPASKRHKTGIPASDIVKAATPRSADPGSASPHAEMVDKNKTVEN
VVSSSSKTCVMMALQDSAGSKPSIHPLAPVGPPFLMNKYKLDNRPTAFKIISPLPAGLAN
VATLKEYFSSYGDLSAVELEDEPSDYDGVGSETLKNCSACVTFTTRRSAERAFLNGKCWQ
GKNLKFAWLTSSTSSNEPGSGQNSFA
Download sequence
Identical sequences 3694.gw1.XVII.686.1

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